Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
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- GO: Anatomical entity
Phenotypes
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Gene: Gm29183 ENSMUSG00000101344

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Description

predicted gene 29183 [Source:MGI Symbol;Acc:MGI:5579889]

Location

Chromosome 1: 73,657,233-73,944,502 reverse strand.

GRCm39:CM000994.3

About this gene

This gene has 17 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000189514.2	Gm29183-202	2094	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000360107.1	Gm29183-211	1260	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000191114.7	Gm29183-203	1227	No protein	-	lncRNA		TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000341152.1	Gm29183-205	1123	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000341155.1	Gm29183-208	1070	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000360112.1	Gm29183-216	1028	No protein	-	lncRNA		-
ENSMUST00000360111.1	Gm29183-215	995	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000360109.1	Gm29183-213	983	No protein	-	lncRNA		-
ENSMUST00000360110.1	Gm29183-214	951	No protein	-	lncRNA		-
ENSMUST00000360108.1	Gm29183-212	909	No protein	-	lncRNA		-
ENSMUST00000188600.2	Gm29183-201	790	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000341156.1	Gm29183-209	784	No protein	-	lncRNA		-
ENSMUST00000341529.1	Gm29183-210	772	No protein	-	lncRNA		-
ENSMUST00000360113.1	Gm29183-217	769	No protein	-	lncRNA		-
ENSMUST00000341153.1	Gm29183-206	588	No protein	-	lncRNA		-
ENSMUST00000341151.1	Gm29183-204	535	No protein	-	lncRNA		-
ENSMUST00000341154.1	Gm29183-207	440	No protein	-	lncRNA		-

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Summary

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