Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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ID History
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Gene: 1700025K24Rik ENSMUSG00000099747

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Description

RIKEN cDNA 1700025K24 gene [Source:MGI Symbol;Acc:MGI:1916668]

Location

Chromosome 17: 54,659,142-54,677,136 reverse strand.

GRCm39:CM001010.3

About this gene

This gene has 17 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000190635.3	1700025K24Rik-201	1243	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000258595.1	1700025K24Rik-204	1531	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258593.1	1700025K24Rik-202	1499	No protein	-	lncRNA		-
ENSMUST00000258600.1	1700025K24Rik-209	1006	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258598.1	1700025K24Rik-207	880	No protein	-	lncRNA		-
ENSMUST00000258594.1	1700025K24Rik-203	868	No protein	-	lncRNA		-
ENSMUST00000258597.1	1700025K24Rik-206	839	No protein	-	lncRNA		-
ENSMUST00000258607.1	1700025K24Rik-216	816	No protein	-	lncRNA		-
ENSMUST00000258603.1	1700025K24Rik-212	811	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000258599.1	1700025K24Rik-208	786	No protein	-	lncRNA		-
ENSMUST00000258608.1	1700025K24Rik-217	785	No protein	-	lncRNA		-
ENSMUST00000258596.1	1700025K24Rik-205	744	No protein	-	lncRNA		-
ENSMUST00000258602.1	1700025K24Rik-211	699	No protein	-	lncRNA		-
ENSMUST00000258606.1	1700025K24Rik-215	698	No protein	-	lncRNA		-
ENSMUST00000258601.1	1700025K24Rik-210	690	No protein	-	lncRNA		-
ENSMUST00000258605.1	1700025K24Rik-214	674	No protein	-	lncRNA		-
ENSMUST00000258604.1	1700025K24Rik-213	633	No protein	-	lncRNA		-

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Summary

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