Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- GO: Anatomical entity
Phenotypes
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ID History
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Gene: Gm28836 ENSMUSG00000099343

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Description

predicted gene 28836 [Source:MGI Symbol;Acc:MGI:5579542]

Location

Chromosome 1: 21,278,944-21,341,891 reverse strand.

GRCm39:CM000994.3

About this gene

This gene has 17 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000295881.1	Gm28836-202	517	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000295888.1	Gm28836-209	847	No protein	-	lncRNA		-
ENSMUST00000295887.1	Gm28836-208	820	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000295889.1	Gm28836-210	766	No protein	-	lncRNA		-
ENSMUST00000185842.3	Gm28836-201	762	No protein	-	lncRNA		TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000295886.1	Gm28836-207	745	No protein	-	lncRNA		-
ENSMUST00000295890.1	Gm28836-211	707	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000295891.1	Gm28836-212	673	No protein	-	lncRNA		-
ENSMUST00000295884.1	Gm28836-205	656	No protein	-	lncRNA		-
ENSMUST00000295885.1	Gm28836-206	579	No protein	-	lncRNA		-
ENSMUST00000295883.1	Gm28836-204	543	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000295882.1	Gm28836-203	532	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000295894.1	Gm28836-215	532	No protein	-	lncRNA		-
ENSMUST00000295893.1	Gm28836-214	498	No protein	-	lncRNA		-
ENSMUST00000295895.1	Gm28836-216	496	No protein	-	lncRNA		-
ENSMUST00000295892.1	Gm28836-213	423	No protein	-	lncRNA		-
ENSMUST00000295896.1	Gm28836-217	378	No protein	-	lncRNA		-

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Summary

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