Gene: 1700034P13Rik ENSMUSG00000097893

Description

RIKEN cDNA 1700034P13 gene [Source:MGI Symbol;Acc:MGI:1920581]

Location

Chromosome 1: 9,817,072-9,862,153 forward strand.

GRCm39:CM000994.3

About this gene

This gene has 88 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000181821.8	1700034P13Rik-202	1996	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000289700.1	1700034P13Rik-221	2096	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000289699.1	1700034P13Rik-220	2061	No protein	-	lncRNA	-
ENSMUST00000289697.1	1700034P13Rik-218	2038	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000289695.1	1700034P13Rik-216	1983	No protein	-	lncRNA	-
ENSMUST00000289694.1	1700034P13Rik-215	1979	No protein	-	lncRNA	-
ENSMUST00000289696.1	1700034P13Rik-217	1969	No protein	-	lncRNA	-
ENSMUST00000289698.1	1700034P13Rik-219	1942	No protein	-	lncRNA	-
ENSMUST00000181358.8	1700034P13Rik-201	1343	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000289764.1	1700034P13Rik-285	1323	No protein	-	lncRNA	-
ENSMUST00000209020.3	1700034P13Rik-207	1314	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000289701.1	1700034P13Rik-222	1305	No protein	-	lncRNA	-
ENSMUST00000289703.1	1700034P13Rik-224	1266	No protein	-	lncRNA	-
ENSMUST00000289702.1	1700034P13Rik-223	1257	No protein	-	lncRNA	-
ENSMUST00000289705.1	1700034P13Rik-226	1248	No protein	-	lncRNA	-
ENSMUST00000189322.4	1700034P13Rik-203	1246	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000289688.1	1700034P13Rik-209	1232	No protein	-	lncRNA	-
ENSMUST00000289704.1	1700034P13Rik-225	1214	No protein	-	lncRNA	-
ENSMUST00000289749.1	1700034P13Rik-270	1182	No protein	-	lncRNA	-
ENSMUST00000207445.3	1700034P13Rik-206	1149	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000289689.1	1700034P13Rik-210	1121	No protein	-	lncRNA	-
ENSMUST00000289762.1	1700034P13Rik-283	1112	No protein	-	lncRNA	-
ENSMUST00000289690.1	1700034P13Rik-211	1110	No protein	-	lncRNA	-
ENSMUST00000246007.2	1700034P13Rik-208	1072	No protein	-	lncRNA	-
ENSMUST00000289691.1	1700034P13Rik-212	1030	No protein	-	lncRNA	-
ENSMUST00000189431.3	1700034P13Rik-204	980	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000289754.1	1700034P13Rik-275	976	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000289707.1	1700034P13Rik-228	945	No protein	-	lncRNA	-
ENSMUST00000289708.1	1700034P13Rik-229	924	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000289745.1	1700034P13Rik-266	907	No protein	-	lncRNA	-
ENSMUST00000289693.1	1700034P13Rik-214	901	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000289706.1	1700034P13Rik-227	879	No protein	-	lncRNA	-
ENSMUST00000191287.8	1700034P13Rik-205	865	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000289751.1	1700034P13Rik-272	825	No protein	-	lncRNA	-
ENSMUST00000289723.1	1700034P13Rik-244	813	No protein	-	lncRNA	-
ENSMUST00000289709.1	1700034P13Rik-230	809	No protein	-	lncRNA	-
ENSMUST00000289719.1	1700034P13Rik-240	807	No protein	-	lncRNA	-
ENSMUST00000289715.1	1700034P13Rik-236	804	No protein	-	lncRNA	-
ENSMUST00000289710.1	1700034P13Rik-231	795	No protein	-	lncRNA	-
ENSMUST00000289712.1	1700034P13Rik-233	794	No protein	-	lncRNA	-
ENSMUST00000289711.1	1700034P13Rik-232	787	No protein	-	lncRNA	-
ENSMUST00000289726.1	1700034P13Rik-247	758	No protein	-	lncRNA	-
ENSMUST00000289746.1	1700034P13Rik-267	753	No protein	-	lncRNA	-
ENSMUST00000289758.1	1700034P13Rik-279	745	No protein	-	lncRNA	-
ENSMUST00000289744.1	1700034P13Rik-265	711	No protein	-	lncRNA	-
ENSMUST00000289738.1	1700034P13Rik-259	701	No protein	-	lncRNA	-
ENSMUST00000289743.1	1700034P13Rik-264	686	No protein	-	lncRNA	-
ENSMUST00000289714.1	1700034P13Rik-235	648	No protein	-	lncRNA	-
ENSMUST00000289718.1	1700034P13Rik-239	635	No protein	-	lncRNA	-
ENSMUST00000289720.1	1700034P13Rik-241	615	No protein	-	lncRNA	-
ENSMUST00000289730.1	1700034P13Rik-251	615	No protein	-	lncRNA	-
ENSMUST00000289748.1	1700034P13Rik-269	612	No protein	-	lncRNA	-
ENSMUST00000289727.1	1700034P13Rik-248	608	No protein	-	lncRNA	-
ENSMUST00000289729.1	1700034P13Rik-250	604	No protein	-	lncRNA	-
ENSMUST00000289757.1	1700034P13Rik-278	604	No protein	-	lncRNA	-
ENSMUST00000289732.1	1700034P13Rik-253	598	No protein	-	lncRNA	-
ENSMUST00000289741.1	1700034P13Rik-262	595	No protein	-	lncRNA	-
ENSMUST00000289717.1	1700034P13Rik-238	587	No protein	-	lncRNA	-
ENSMUST00000289728.1	1700034P13Rik-249	582	No protein	-	lncRNA	-
ENSMUST00000289747.1	1700034P13Rik-268	576	No protein	-	lncRNA	-
ENSMUST00000289713.1	1700034P13Rik-234	575	No protein	-	lncRNA	-
ENSMUST00000289752.1	1700034P13Rik-273	574	No protein	-	lncRNA	-
ENSMUST00000289737.1	1700034P13Rik-258	573	No protein	-	lncRNA	-
ENSMUST00000289725.1	1700034P13Rik-246	568	No protein	-	lncRNA	-
ENSMUST00000289733.1	1700034P13Rik-254	559	No protein	-	lncRNA	-
ENSMUST00000289756.1	1700034P13Rik-277	551	No protein	-	lncRNA	-
ENSMUST00000289716.1	1700034P13Rik-237	547	No protein	-	lncRNA	-
ENSMUST00000289736.1	1700034P13Rik-257	542	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000289760.1	1700034P13Rik-281	541	No protein	-	lncRNA	-
ENSMUST00000289740.1	1700034P13Rik-261	533	No protein	-	lncRNA	-
ENSMUST00000289755.1	1700034P13Rik-276	517	No protein	-	lncRNA	-
ENSMUST00000289765.1	1700034P13Rik-286	512	No protein	-	lncRNA	-
ENSMUST00000289753.1	1700034P13Rik-274	511	No protein	-	lncRNA	-
ENSMUST00000289759.1	1700034P13Rik-280	505	No protein	-	lncRNA	-
ENSMUST00000289724.1	1700034P13Rik-245	500	No protein	-	lncRNA	-
ENSMUST00000289735.1	1700034P13Rik-256	495	No protein	-	lncRNA	-
ENSMUST00000289721.1	1700034P13Rik-242	463	No protein	-	lncRNA	-
ENSMUST00000289739.1	1700034P13Rik-260	462	No protein	-	lncRNA	-
ENSMUST00000289734.1	1700034P13Rik-255	449	No protein	-	lncRNA	-
ENSMUST00000289722.1	1700034P13Rik-243	447	No protein	-	lncRNA	-
ENSMUST00000289742.1	1700034P13Rik-263	439	No protein	-	lncRNA	-
ENSMUST00000289766.1	1700034P13Rik-287	396	No protein	-	lncRNA	-
ENSMUST00000289750.1	1700034P13Rik-271	379	No protein	-	lncRNA	-
ENSMUST00000289731.1	1700034P13Rik-252	376	No protein	-	lncRNA	-
ENSMUST00000289692.1	1700034P13Rik-213	373	No protein	-	lncRNA	-
ENSMUST00000289763.1	1700034P13Rik-284	359	No protein	-	lncRNA	-
ENSMUST00000289761.1	1700034P13Rik-282	302	No protein	-	lncRNA	-
ENSMUST00000289767.1	1700034P13Rik-288	285	No protein	-	lncRNA	-

Gene: 1700034P13Rik ENSMUSG00000097893

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Gene: 1700034P13Rik ENSMUSG00000097893

Summary

About Us

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