Summary
- Splice variants
- Transcript comparison
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Gene: Gm10561 ENSMUSG00000097649

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Description

predicted gene 10561 [Source:MGI Symbol;Acc:MGI:3648163]

Gene Synonyms

EG628004

Location

Chromosome 1: 55,265,340-55,274,785 forward strand.

GRCm39:CM000994.3

About this gene

This gene has 10 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000209801.4	Gm10561-202	1230	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000181563.3	Gm10561-201	1999	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000274151.1	Gm10561-204	1739	No protein	-	lncRNA		-
ENSMUST00000247545.2	Gm10561-203	1343	No protein	-	lncRNA		-
ENSMUST00000274153.1	Gm10561-206	1062	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000274152.1	Gm10561-205	1052	No protein	-	lncRNA		-
ENSMUST00000274154.1	Gm10561-207	1008	No protein	-	lncRNA		-
ENSMUST00000274157.1	Gm10561-210	977	No protein	-	lncRNA		-
ENSMUST00000274155.1	Gm10561-208	785	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000274156.1	Gm10561-209	690	No protein	-	lncRNA		-

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Summary

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