Summary
- Splice variants
- Transcript comparison
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Gene: A130051J06Rik ENSMUSG00000097643

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Description

RIKEN cDNA A130051J0 gene [Source:MGI Symbol;Acc:MGI:3642574]

Location

Chromosome 15: 95,678,204-95,702,282 reverse strand.

GRCm39:CM001008.3

About this gene

This gene has 13 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000300602.1	A130051J06Rik-203	559	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000180649.3	A130051J06Rik-201	2629	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000300606.1	A130051J06Rik-207	1637	No protein	-	lncRNA		-
ENSMUST00000300604.1	A130051J06Rik-205	1338	No protein	-	lncRNA		-
ENSMUST00000300607.1	A130051J06Rik-208	1222	No protein	-	lncRNA		-
ENSMUST00000300611.1	A130051J06Rik-212	977	No protein	-	lncRNA		-
ENSMUST00000300605.1	A130051J06Rik-206	834	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000300603.1	A130051J06Rik-204	691	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000300612.1	A130051J06Rik-213	685	No protein	-	lncRNA		-
ENSMUST00000300609.1	A130051J06Rik-210	634	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000300610.1	A130051J06Rik-211	563	No protein	-	lncRNA		-
ENSMUST00000300608.1	A130051J06Rik-209	486	No protein	-	lncRNA		-
ENSMUST00000226780.2	A130051J06Rik-202	357	No protein	-	lncRNA		-

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Summary

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