Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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Molecular interactions
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ID History
- Gene history

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Gene: 9430065F17Rik ENSMUSG00000097360

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Description

RIKEN cDNA 9430065F17 gene [Source:MGI Symbol;Acc:MGI:1924606]

Location

Chromosome 13: 67,701,006-67,712,129 forward strand.

GRCm39:CM001006.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000180824.3	9430065F17Rik-201	533	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000224664.3	9430065F17Rik-205	1431	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000342782.1	9430065F17Rik-209	1393	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000223845.2	9430065F17Rik-203	1380	No protein	-	lncRNA		-
ENSMUST00000342780.1	9430065F17Rik-207	1333	No protein	-	lncRNA		-
ENSMUST00000224521.2	9430065F17Rik-204	1280	No protein	-	lncRNA		-
ENSMUST00000342779.1	9430065F17Rik-206	1189	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000180908.10	9430065F17Rik-202	1144	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000342783.1	9430065F17Rik-210	1093	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000342781.1	9430065F17Rik-208	1030	No protein	-	lncRNA		-
ENSMUST00000342785.1	9430065F17Rik-212	979	No protein	-	lncRNA		-
ENSMUST00000342784.1	9430065F17Rik-211	960	No protein	-	lncRNA		-
ENSMUST00000342787.1	9430065F17Rik-214	557	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000342788.1	9430065F17Rik-215	532	No protein	-	lncRNA		-
ENSMUST00000342790.1	9430065F17Rik-217	457	No protein	-	lncRNA		-
ENSMUST00000342789.1	9430065F17Rik-216	442	No protein	-	lncRNA		-
ENSMUST00000342786.1	9430065F17Rik-213	365	No protein	-	lncRNA		-
ENSMUST00000342791.1	9430065F17Rik-218	345	No protein	-	lncRNA		-

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Summary

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