Gene: 1110038B12Rik ENSMUSG00000092203

Description

RIKEN cDNA 1110038B12 gene [Source:MGI Symbol;Acc:MGI:1916013]

Location

Chromosome 17: 35,149,718-35,171,867 reverse strand.

GRCm39:CM001010.3

About this gene

This gene has 87 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000174464.4	1110038B12Rik-207	2022	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000174173.4	1110038B12Rik-206	1891	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000172531.4	1110038B12Rik-202	1842	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000174039.10	1110038B12Rik-205	1086	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000173811.10	1110038B12Rik-204	917	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000371032.1	1110038B12Rik-238	802	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241056.2	1110038B12Rik-210	2278	No protein	-	lncRNA	-
ENSMUST00000242750.2	1110038B12Rik-221	2097	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371036.1	1110038B12Rik-242	2031	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000247482.2	1110038B12Rik-237	2025	No protein	-	lncRNA	-
ENSMUST00000247447.1	1110038B12Rik-235	1808	No protein	-	lncRNA	-
ENSMUST00000247300.1	1110038B12Rik-234	1799	No protein	-	lncRNA	-
ENSMUST00000247460.1	1110038B12Rik-236	1639	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241911.2	1110038B12Rik-216	1632	No protein	-	lncRNA	-
ENSMUST00000242812.2	1110038B12Rik-222	1203	No protein	-	lncRNA	-
ENSMUST00000371033.1	1110038B12Rik-239	1109	No protein	-	lncRNA	-
ENSMUST00000246439.2	1110038B12Rik-231	1025	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000172501.10	1110038B12Rik-201	1019	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000246393.2	1110038B12Rik-229	988	No protein	-	lncRNA	-
ENSMUST00000243070.2	1110038B12Rik-223	957	No protein	-	lncRNA	-
ENSMUST00000242557.2	1110038B12Rik-220	846	No protein	-	lncRNA	-
ENSMUST00000246312.1	1110038B12Rik-228	834	No protein	-	lncRNA	-
ENSMUST00000246468.2	1110038B12Rik-232	832	No protein	-	lncRNA	-
ENSMUST00000371074.1	1110038B12Rik-279	813	No protein	-	lncRNA	-
ENSMUST00000246606.2	1110038B12Rik-233	782	No protein	-	lncRNA	-
ENSMUST00000371066.1	1110038B12Rik-271	779	No protein	-	lncRNA	-
ENSMUST00000371068.1	1110038B12Rik-273	771	No protein	-	lncRNA	-
ENSMUST00000245494.2	1110038B12Rik-227	769	No protein	-	lncRNA	-
ENSMUST00000371058.1	1110038B12Rik-264	738	No protein	-	lncRNA	-
ENSMUST00000371054.1	1110038B12Rik-260	732	No protein	-	lncRNA	-
ENSMUST00000242472.2	1110038B12Rik-219	731	No protein	-	lncRNA	-
ENSMUST00000371038.1	1110038B12Rik-244	710	No protein	-	lncRNA	-
ENSMUST00000371047.1	1110038B12Rik-253	672	No protein	-	lncRNA	-
ENSMUST00000371048.1	1110038B12Rik-254	668	No protein	-	lncRNA	-
ENSMUST00000241531.2	1110038B12Rik-213	656	No protein	-	lncRNA	-
ENSMUST00000241683.2	1110038B12Rik-215	653	No protein	-	lncRNA	-
ENSMUST00000173070.10	1110038B12Rik-203	638	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000371073.1	1110038B12Rik-278	622	No protein	-	lncRNA	-
ENSMUST00000245242.2	1110038B12Rik-226	621	No protein	-	lncRNA	-
ENSMUST00000371050.1	1110038B12Rik-256	621	No protein	-	lncRNA	-
ENSMUST00000243203.2	1110038B12Rik-224	615	No protein	-	lncRNA	-
ENSMUST00000371079.1	1110038B12Rik-284	605	No protein	-	lncRNA	-
ENSMUST00000371060.1	1110038B12Rik-266	604	No protein	-	lncRNA	-
ENSMUST00000371065.1	1110038B12Rik-270	595	No protein	-	lncRNA	-
ENSMUST00000241432.2	1110038B12Rik-212	593	No protein	-	lncRNA	-
ENSMUST00000371035.1	1110038B12Rik-241	578	No protein	-	lncRNA	-
ENSMUST00000371057.1	1110038B12Rik-263	578	No protein	-	lncRNA	-
ENSMUST00000371071.1	1110038B12Rik-276	576	No protein	-	lncRNA	-
ENSMUST00000371070.1	1110038B12Rik-275	575	No protein	-	lncRNA	-
ENSMUST00000371076.1	1110038B12Rik-281	569	No protein	-	lncRNA	-
ENSMUST00000371063.1	1110038B12Rik-269	565	No protein	-	lncRNA	-
ENSMUST00000371067.1	1110038B12Rik-272	565	No protein	-	lncRNA	-
ENSMUST00000174714.10	1110038B12Rik-208	564	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000371034.1	1110038B12Rik-240	563	No protein	-	lncRNA	-
ENSMUST00000371078.1	1110038B12Rik-283	562	No protein	-	lncRNA	-
ENSMUST00000371080.1	1110038B12Rik-285	561	No protein	-	lncRNA	-
ENSMUST00000371081.1	1110038B12Rik-286	545	No protein	-	lncRNA	-
ENSMUST00000371075.1	1110038B12Rik-280	534	No protein	-	lncRNA	-
ENSMUST00000371056.1	1110038B12Rik-262	531	No protein	-	lncRNA	-
ENSMUST00000371069.1	1110038B12Rik-274	529	No protein	-	lncRNA	-
ENSMUST00000371061.1	1110038B12Rik-267	524	No protein	-	lncRNA	-
ENSMUST00000240974.2	1110038B12Rik-209	518	No protein	-	lncRNA	-
ENSMUST00000371045.1	1110038B12Rik-251	517	No protein	-	lncRNA	-
ENSMUST00000371049.1	1110038B12Rik-255	515	No protein	-	lncRNA	-
ENSMUST00000241591.2	1110038B12Rik-214	508	No protein	-	lncRNA	-
ENSMUST00000242404.2	1110038B12Rik-218	507	No protein	-	lncRNA	-
ENSMUST00000371055.1	1110038B12Rik-261	505	No protein	-	lncRNA	-
ENSMUST00000371072.1	1110038B12Rik-277	484	No protein	-	lncRNA	-
ENSMUST00000243406.2	1110038B12Rik-225	470	No protein	-	lncRNA	-
ENSMUST00000242276.2	1110038B12Rik-217	455	No protein	-	lncRNA	-
ENSMUST00000371053.1	1110038B12Rik-259	454	No protein	-	lncRNA	-
ENSMUST00000371046.1	1110038B12Rik-252	451	No protein	-	lncRNA	-
ENSMUST00000371037.1	1110038B12Rik-243	444	No protein	-	lncRNA	-
ENSMUST00000371052.1	1110038B12Rik-258	436	No protein	-	lncRNA	-
ENSMUST00000371051.1	1110038B12Rik-257	432	No protein	-	lncRNA	-
ENSMUST00000371077.1	1110038B12Rik-282	424	No protein	-	lncRNA	-
ENSMUST00000371059.1	1110038B12Rik-265	420	No protein	-	lncRNA	-
ENSMUST00000241231.2	1110038B12Rik-211	416	No protein	-	lncRNA	-
ENSMUST00000371062.1	1110038B12Rik-268	410	No protein	-	lncRNA	-
ENSMUST00000246400.1	1110038B12Rik-230	402	No protein	-	lncRNA	-
ENSMUST00000371041.1	1110038B12Rik-247	385	No protein	-	lncRNA	-
ENSMUST00000371039.1	1110038B12Rik-245	373	No protein	-	lncRNA	-
ENSMUST00000371040.1	1110038B12Rik-246	328	No protein	-	lncRNA	-
ENSMUST00000371082.1	1110038B12Rik-287	321	No protein	-	lncRNA	-
ENSMUST00000371043.1	1110038B12Rik-249	317	No protein	-	lncRNA	-
ENSMUST00000371042.1	1110038B12Rik-248	284	No protein	-	lncRNA	-
ENSMUST00000371044.1	1110038B12Rik-250	257	No protein	-	lncRNA	-

Gene: 1110038B12Rik ENSMUSG00000092203

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Gene: 1110038B12Rik ENSMUSG00000092203

Summary

About Us

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