Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Comparative Genomics
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ID History
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Gene: Gm16213 ENSMUSG00000090017

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Description

predicted gene 16213 [Source:MGI Symbol;Acc:MGI:3801725]

Location

Chromosome 3: 152,617,993-152,780,919 forward strand.

GRCm39:CM000996.3

About this gene

This gene has 13 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000374559.1	Gm16213-203	746	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000374560.1	Gm16213-204	2418	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000243942.2	Gm16213-202	885	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000374563.1	Gm16213-206	832	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000374568.1	Gm16213-211	817	No protein	-	lncRNA		-
ENSMUST00000374569.1	Gm16213-212	764	No protein	-	lncRNA		-
ENSMUST00000374564.1	Gm16213-207	751	No protein	-	lncRNA		-
ENSMUST00000374567.1	Gm16213-210	722	No protein	-	lncRNA		-
ENSMUST00000374565.1	Gm16213-208	692	No protein	-	lncRNA		-
ENSMUST00000160076.2	Gm16213-201	639	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000374561.1	Gm16213-205	467	No protein	-	lncRNA		-
ENSMUST00000374566.1	Gm16213-209	449	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000374570.1	Gm16213-213	299	No protein	-	lncRNA		-

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Summary

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