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- Transcript comparison
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Gene: Gm16341 ENSMUSG00000087538

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Description

predicted gene 16341 [Source:MGI Symbol;Acc:MGI:3840137]

Location

Chromosome 1: 86,173,936-86,229,124 reverse strand.

GRCm39:CM000994.3

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000347562.1	Gm16341-202	1723	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347571.1	Gm16341-211	1100	No protein	-	lncRNA		-
ENSMUST00000347564.1	Gm16341-204	874	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347563.1	Gm16341-203	654	No protein	-	lncRNA		-
ENSMUST00000347569.1	Gm16341-209	590	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347572.1	Gm16341-212	549	No protein	-	lncRNA		-
ENSMUST00000347568.1	Gm16341-208	490	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347566.1	Gm16341-206	474	No protein	-	lncRNA		-
ENSMUST00000347570.1	Gm16341-210	473	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347573.1	Gm16341-213	429	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000347565.1	Gm16341-205	398	No protein	-	lncRNA		-
ENSMUST00000126385.2	Gm16341-201	377	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000347567.1	Gm16341-207	250	No protein	-	lncRNA		-
ENSMUST00000347574.1	Gm16341-214	233	No protein	-	lncRNA		-

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Summary

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