Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Comparative Genomics
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- GO: Anatomical entity
Phenotypes
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ID History
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Gene: 1810059C17Rik ENSMUSG00000086340

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Description

RIKEN cDNA 1810059C17 gene [Source:MGI Symbol;Acc:MGI:1917068]

Location

Chromosome 2: 18,053,957-18,069,283 reverse strand.

GRCm39:CM000995.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000346646.1	1810059C17Rik-202	358	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000346656.1	1810059C17Rik-212	1258	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000346647.1	1810059C17Rik-203	1174	No protein	-	lncRNA		-
ENSMUST00000346654.1	1810059C17Rik-210	1144	No protein	-	lncRNA		-
ENSMUST00000346655.1	1810059C17Rik-211	834	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000346652.1	1810059C17Rik-208	755	No protein	-	lncRNA		-
ENSMUST00000125173.3	1810059C17Rik-201	550	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000346649.1	1810059C17Rik-205	541	No protein	-	lncRNA		-
ENSMUST00000346653.1	1810059C17Rik-209	482	No protein	-	lncRNA		-
ENSMUST00000346648.1	1810059C17Rik-204	444	No protein	-	lncRNA		-
ENSMUST00000346650.1	1810059C17Rik-206	424	No protein	-	lncRNA		-
ENSMUST00000346651.1	1810059C17Rik-207	424	No protein	-	lncRNA		-

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Summary

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