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- Splice variants
- Transcript comparison
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Gene: Gm13421 ENSMUSG00000085929

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Description

predicted gene 13421 [Source:MGI Symbol;Acc:MGI:3649922]

Location

Chromosome 2: 27,430,158-27,436,104 forward strand.

GRCm39:CM000995.3

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000132898.4	Gm13421-201	3733	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000247013.2	Gm13421-204	3752	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244438.2	Gm13421-203	2627	No protein	-	lncRNA		-
ENSMUST00000321340.1	Gm13421-205	1850	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000142511.3	Gm13421-202	1842	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000321341.1	Gm13421-206	1539	No protein	-	lncRNA		-
ENSMUST00000321344.1	Gm13421-209	719	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000321342.1	Gm13421-207	687	No protein	-	lncRNA		-
ENSMUST00000321346.1	Gm13421-211	605	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000321343.1	Gm13421-208	483	No protein	-	lncRNA		-
ENSMUST00000321347.1	Gm13421-212	454	No protein	-	lncRNA		-
ENSMUST00000321345.1	Gm13421-210	412	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000321348.1	Gm13421-213	354	No protein	-	lncRNA		-
ENSMUST00000321349.1	Gm13421-214	352	No protein	-	lncRNA		-

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Summary

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