Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm12796 ENSMUSG00000085721

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Description

predicted gene 12796 [Source:MGI Symbol;Acc:MGI:3649207]

Location

Chromosome 4: 101,148,490-101,178,942 reverse strand.

GRCm39:CM000997.3

About this gene

This gene has 9 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000131864.2	Gm12796-201	344	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000374431.1	Gm12796-205	1935	No protein	-	lncRNA		-
ENSMUST00000242149.2	Gm12796-202	1434	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000374430.1	Gm12796-204	1293	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000374433.1	Gm12796-207	861	No protein	-	lncRNA		-
ENSMUST00000374432.1	Gm12796-206	811	No protein	-	lncRNA		-
ENSMUST00000374435.1	Gm12796-209	729	No protein	-	lncRNA		-
ENSMUST00000374429.1	Gm12796-203	679	No protein	-	lncRNA		-
ENSMUST00000374434.1	Gm12796-208	579	No protein	-	lncRNA		-

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Summary

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