Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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- GO: Anatomical entity
Phenotypes
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Molecular interactions
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ID History
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Gene: Gm12602 ENSMUSG00000085569

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Description

predicted gene 12602 [Source:MGI Symbol;Acc:MGI:3651757]

Location

Chromosome 4: 89,018,101-89,046,819 reverse strand.

GRCm39:CM000997.3

About this gene

This gene has 17 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000242193.2	Gm12602-203	1632	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000280729.1	Gm12602-205	2480	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000280728.1	Gm12602-204	2202	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000280736.1	Gm12602-212	1852	No protein	-	lncRNA		-
ENSMUST00000154352.4	Gm12602-202	1799	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000138655.4	Gm12602-201	1797	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000280738.1	Gm12602-214	1692	No protein	-	lncRNA		-
ENSMUST00000280730.1	Gm12602-206	1680	No protein	-	lncRNA		-
ENSMUST00000280737.1	Gm12602-213	1529	No protein	-	lncRNA		-
ENSMUST00000280735.1	Gm12602-211	1487	No protein	-	lncRNA		-
ENSMUST00000280731.1	Gm12602-207	1466	No protein	-	lncRNA		-
ENSMUST00000280734.1	Gm12602-210	1306	No protein	-	lncRNA		-
ENSMUST00000280740.1	Gm12602-216	856	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000280739.1	Gm12602-215	758	No protein	-	lncRNA		-
ENSMUST00000280741.1	Gm12602-217	640	No protein	-	lncRNA		-
ENSMUST00000280733.1	Gm12602-209	381	No protein	-	lncRNA		-
ENSMUST00000280732.1	Gm12602-208	244	No protein	-	lncRNA		-

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Summary

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