Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Orthologues
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- GO: Anatomical entity
Phenotypes
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Molecular interactions
External references
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ID History
- Gene history

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Gene: Gm12708 ENSMUSG00000084918

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Description

predicted gene 12708 [Source:MGI Symbol;Acc:MGI:3652178]

Location

Chromosome 4: 95,081,431-95,097,993 forward strand.

GRCm39:CM000997.3

About this gene

This gene has 11 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000243682.2	Gm12708-204	1444	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000241996.2	Gm12708-203	1959	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000298136.1	Gm12708-208	1594	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000298134.1	Gm12708-206	1467	No protein	-	lncRNA		-
ENSMUST00000298138.1	Gm12708-210	1308	No protein	-	lncRNA		-
ENSMUST00000298135.1	Gm12708-207	1242	No protein	-	lncRNA		-
ENSMUST00000245371.2	Gm12708-205	1177	No protein	-	lncRNA		-
ENSMUST00000136941.3	Gm12708-202	1152	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000298137.1	Gm12708-209	863	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000298139.1	Gm12708-211	640	No protein	-	lncRNA		-
ENSMUST00000126143.2	Gm12708-201	349	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

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Summary

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