Gene: Tep1 ENSMUSG00000006281

Description

telomerase associated protein 1 [Source:MGI Symbol;Acc:MGI:109573]

Gene Synonyms

Tp1

Location

Chromosome 14: 51,061,516-51,108,017 reverse strand.

GRCm39:CM001007.3

About this gene

This gene has 8 transcripts (splice variants), 107 orthologues, 25 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000006444.9	Tep1-201	8171	2629aa	ENSMUSP00000006444.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36907	P97499	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000226222.2	Tep1-202	434	79aa	ENSMUSP00000154505.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BRB1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000226430.2	Tep1-203	5690	489aa	ENSMUSP00000154492.2	Nonsense mediated decay		A0A2I3BR80	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000227526.2	Tep1-207	737	51aa	ENSMUSP00000153878.2	Nonsense mediated decay		A0A2I3BQ06	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000227193.2	Tep1-205	380	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000227228.2	Tep1-206	1274	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000228562.2	Tep1-208	702	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000226789.2	Tep1-204	551	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Tep1 ENSMUSG00000006281

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Gene: Tep1 ENSMUSG00000006281

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