Summary
- Splice variants
- Transcript comparison
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Gene: C130021I20Rik ENSMUSG00000052951

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Description

Riken cDNA C130021I20 gene [Source:MGI Symbol;Acc:MGI:3639863]

Location

Chromosome 2: 33,531,205-33,556,659 forward strand.

GRCm39:CM000995.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000307028.1	C130021I20Rik-203	719	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000147294.3	C130021I20Rik-201	3693	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000307034.1	C130021I20Rik-209	1876	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000307035.1	C130021I20Rik-210	1643	No protein	-	lncRNA		-
ENSMUST00000152118.2	C130021I20Rik-202	745	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000307033.1	C130021I20Rik-208	612	No protein	-	lncRNA		-
ENSMUST00000307032.1	C130021I20Rik-207	468	No protein	-	lncRNA		-
ENSMUST00000307036.1	C130021I20Rik-211	452	No protein	-	lncRNA		-
ENSMUST00000307029.1	C130021I20Rik-204	386	No protein	-	lncRNA		-
ENSMUST00000307030.1	C130021I20Rik-205	358	No protein	-	lncRNA		-
ENSMUST00000307031.1	C130021I20Rik-206	348	No protein	-	lncRNA		-
ENSMUST00000307037.1	C130021I20Rik-212	338	No protein	-	lncRNA		-

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Summary

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