Gene: Adgrf5 ENSMUSG00000056492

Description

adhesion G protein-coupled receptor F5 [Source:MGI Symbol;Acc:MGI:2182928]

Gene Synonyms

8430401C09Rik, Gpr116

Location

Chromosome 17: 43,671,342-43,770,448 forward strand.

GRCm39:CM001010.3

About this gene

This gene has 6 transcripts (splice variants), 335 orthologues, 41 paralogues and is associated with 53 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000113599.2	Adgrf5-201	8535	1348aa	ENSMUSP00000109229.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37622	G5E8Q8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000226087.2	Adgrf5-206	4954	1348aa	ENSMUSP00000153049.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37622	G5E8Q8	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000225962.2	Adgrf5-205	4868	1143aa	ENSMUSP00000153373.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YDT5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000224278.2	Adgrf5-202	698	149aa	ENSMUSP00000152923.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YCD3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000225466.2	Adgrf5-204	491	82aa	ENSMUSP00000153704.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YE42	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000225004.2	Adgrf5-203	830	142aa	ENSMUSP00000153304.2	Nonsense mediated decay		A0A286YD74	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Gene: Adgrf5 ENSMUSG00000056492

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Gene: Adgrf5 ENSMUSG00000056492

Summary

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