Gene: Adgre1 ENSMUSG00000004730

Description

adhesion G protein-coupled receptor E1 [Source:MGI Symbol;Acc:MGI:106912]

Gene Synonyms

DD7A5-7, EGF-TM7, Emr1, F4/80, Ly71, TM7LN3

Location

Chromosome 17: 57,665,691-57,790,527 forward strand.

GRCm39:CM001010.3

About this gene

This gene has 5 transcripts (splice variants), 103 orthologues, 41 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000086763.13	Adgre1-202	3238	931aa	ENSMUSP00000083971.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50160	Q3U9R0 Q61549	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000004850.8	Adgre1-201	3124	931aa	ENSMUSP00000004850.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50160	Q3U9R0 Q61549	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000233840.2	Adgre1-205	917	296aa	ENSMUSP00000156743.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2WB94	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000232808.2	Adgre1-203	402	125aa	ENSMUSP00000156744.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2W7X0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000233376.2	Adgre1-204	342	104aa	ENSMUSP00000156948.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2W8A7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Gene: Adgre1 ENSMUSG00000004730

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Gene: Adgre1 ENSMUSG00000004730

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