Gene: Tbx3os1 ENSMUSG00000087516

Description

T-box 3, opposite strand 1 [Source:MGI Symbol;Acc:MGI:3780472]

Gene Synonyms

AW549542, Gm2301

Location

Chromosome 5: 119,708,194-119,810,222 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 68 transcripts (splice variants), 2 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000129108.4	Tbx3os1-201	2091	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000202546.3	Tbx3os1-207	1802	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000202307.2	Tbx3os1-206	1787	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000357007.1	Tbx3os1-268	1628	No protein	-	lncRNA	-
ENSMUST00000357000.1	Tbx3os1-261	1596	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000356954.1	Tbx3os1-216	1551	No protein	-	lncRNA	-
ENSMUST00000356957.1	Tbx3os1-219	1445	No protein	-	lncRNA	-
ENSMUST00000245505.2	Tbx3os1-212	1441	No protein	-	lncRNA	-
ENSMUST00000134493.9	Tbx3os1-202	1436	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000245553.2	Tbx3os1-213	1350	No protein	-	lncRNA	-
ENSMUST00000245826.2	Tbx3os1-214	1289	No protein	-	lncRNA	-
ENSMUST00000356963.1	Tbx3os1-225	1288	No protein	-	lncRNA	-
ENSMUST00000243385.1	Tbx3os1-209	1248	No protein	-	lncRNA	-
ENSMUST00000356956.1	Tbx3os1-218	1215	No protein	-	lncRNA	-
ENSMUST00000356966.1	Tbx3os1-228	1203	No protein	-	lncRNA	-
ENSMUST00000356958.1	Tbx3os1-220	1189	No protein	-	lncRNA	-
ENSMUST00000356986.1	Tbx3os1-248	1183	No protein	-	lncRNA	-
ENSMUST00000201466.5	Tbx3os1-205	1175	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000356985.1	Tbx3os1-247	1153	No protein	-	lncRNA	-
ENSMUST00000244846.2	Tbx3os1-211	1098	No protein	-	lncRNA	-
ENSMUST00000356969.1	Tbx3os1-231	1082	No protein	-	lncRNA	-
ENSMUST00000357002.1	Tbx3os1-263	1082	No protein	-	lncRNA	-
ENSMUST00000244406.2	Tbx3os1-210	1068	No protein	-	lncRNA	-
ENSMUST00000356959.1	Tbx3os1-221	1045	No protein	-	lncRNA	-
ENSMUST00000356972.1	Tbx3os1-234	1045	No protein	-	lncRNA	-
ENSMUST00000357001.1	Tbx3os1-262	1034	No protein	-	lncRNA	-
ENSMUST00000356987.1	Tbx3os1-249	1019	No protein	-	lncRNA	-
ENSMUST00000140101.3	Tbx3os1-203	1005	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000356978.1	Tbx3os1-240	1001	No protein	-	lncRNA	-
ENSMUST00000356979.1	Tbx3os1-241	1001	No protein	-	lncRNA	-
ENSMUST00000356965.1	Tbx3os1-227	977	No protein	-	lncRNA	-
ENSMUST00000356973.1	Tbx3os1-235	973	No protein	-	lncRNA	-
ENSMUST00000356996.1	Tbx3os1-257	968	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000356968.1	Tbx3os1-230	965	No protein	-	lncRNA	-
ENSMUST00000247249.1	Tbx3os1-215	940	No protein	-	lncRNA	-
ENSMUST00000356982.1	Tbx3os1-244	930	No protein	-	lncRNA	-
ENSMUST00000356991.1	Tbx3os1-253	926	No protein	-	lncRNA	-
ENSMUST00000356984.1	Tbx3os1-246	922	No protein	-	lncRNA	-
ENSMUST00000356995.1	Tbx3os1-256	915	No protein	-	lncRNA	-
ENSMUST00000356983.1	Tbx3os1-245	900	No protein	-	lncRNA	-
ENSMUST00000357004.1	Tbx3os1-265	875	No protein	-	lncRNA	-
ENSMUST00000356970.1	Tbx3os1-232	847	No protein	-	lncRNA	-
ENSMUST00000242859.2	Tbx3os1-208	842	No protein	-	lncRNA	-
ENSMUST00000356980.1	Tbx3os1-242	838	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000356990.1	Tbx3os1-252	825	No protein	-	lncRNA	-
ENSMUST00000356967.1	Tbx3os1-229	818	No protein	-	lncRNA	-
ENSMUST00000356992.1	Tbx3os1-254	804	No protein	-	lncRNA	-
ENSMUST00000356999.1	Tbx3os1-260	756	No protein	-	lncRNA	-
ENSMUST00000356975.1	Tbx3os1-237	746	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000356994.1	Tbx3os1-255	714	No protein	-	lncRNA	-
ENSMUST00000356960.1	Tbx3os1-222	699	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000356977.1	Tbx3os1-239	656	No protein	-	lncRNA	-
ENSMUST00000356962.1	Tbx3os1-224	625	No protein	-	lncRNA	-
ENSMUST00000356971.1	Tbx3os1-233	600	No protein	-	lncRNA	-
ENSMUST00000356974.1	Tbx3os1-236	587	No protein	-	lncRNA	-
ENSMUST00000356961.1	Tbx3os1-223	572	No protein	-	lncRNA	-
ENSMUST00000356998.1	Tbx3os1-259	530	No protein	-	lncRNA	-
ENSMUST00000356989.1	Tbx3os1-251	508	No protein	-	lncRNA	-
ENSMUST00000357005.1	Tbx3os1-266	494	No protein	-	lncRNA	-
ENSMUST00000356964.1	Tbx3os1-226	492	No protein	-	lncRNA	-
ENSMUST00000356997.1	Tbx3os1-258	457	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000356988.1	Tbx3os1-250	427	No protein	-	lncRNA	-
ENSMUST00000357003.1	Tbx3os1-264	406	No protein	-	lncRNA	-
ENSMUST00000200851.2	Tbx3os1-204	396	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000356976.1	Tbx3os1-238	395	No protein	-	lncRNA	-
ENSMUST00000356981.1	Tbx3os1-243	387	No protein	-	lncRNA	-
ENSMUST00000356955.1	Tbx3os1-217	372	No protein	-	lncRNA	-
ENSMUST00000357006.1	Tbx3os1-267	322	No protein	-	lncRNA	-

Gene: Tbx3os1 ENSMUSG00000087516

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Gene: Tbx3os1 ENSMUSG00000087516

Summary

About Us

Get help

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