Gene: AV039307 ENSMUSG00000087519

Description

expressed sequence AV039307 [Source:MGI Symbol;Acc:MGI:2139243]

Location

Chromosome 2: 120,680,343-120,745,709 forward strand.

GRCm39:CM000995.3

About this gene

This gene has 75 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000318946.1	AV039307-205	638	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000244859.2	AV039307-204	2573	No protein	-	lncRNA	-
ENSMUST00000318951.1	AV039307-210	1629	No protein	-	lncRNA	-
ENSMUST00000319008.1	AV039307-267	1310	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000318965.1	AV039307-224	1291	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000318959.1	AV039307-218	1233	No protein	-	lncRNA	-
ENSMUST00000319011.1	AV039307-270	1203	No protein	-	lncRNA	-
ENSMUST00000319012.1	AV039307-271	1175	No protein	-	lncRNA	-
ENSMUST00000318975.1	AV039307-234	1174	No protein	-	lncRNA	-
ENSMUST00000318963.1	AV039307-222	1155	No protein	-	lncRNA	-
ENSMUST00000124795.2	AV039307-201	1133	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000319002.1	AV039307-261	1068	No protein	-	lncRNA	-
ENSMUST00000318968.1	AV039307-227	1064	No protein	-	lncRNA	-
ENSMUST00000318957.1	AV039307-216	1063	No protein	-	lncRNA	-
ENSMUST00000318967.1	AV039307-226	1063	No protein	-	lncRNA	-
ENSMUST00000319016.1	AV039307-275	1031	No protein	-	lncRNA	-
ENSMUST00000318988.1	AV039307-247	1008	No protein	-	lncRNA	-
ENSMUST00000319013.1	AV039307-272	980	No protein	-	lncRNA	-
ENSMUST00000319005.1	AV039307-264	951	No protein	-	lncRNA	-
ENSMUST00000318989.1	AV039307-248	947	No protein	-	lncRNA	-
ENSMUST00000319004.1	AV039307-263	933	No protein	-	lncRNA	-
ENSMUST00000318994.1	AV039307-253	931	No protein	-	lncRNA	-
ENSMUST00000319014.1	AV039307-273	931	No protein	-	lncRNA	-
ENSMUST00000318976.1	AV039307-235	922	No protein	-	lncRNA	-
ENSMUST00000319015.1	AV039307-274	902	No protein	-	lncRNA	-
ENSMUST00000318999.1	AV039307-258	878	No protein	-	lncRNA	-
ENSMUST00000319001.1	AV039307-260	851	No protein	-	lncRNA	-
ENSMUST00000318970.1	AV039307-229	844	No protein	-	lncRNA	-
ENSMUST00000318983.1	AV039307-242	824	No protein	-	lncRNA	-
ENSMUST00000318987.1	AV039307-246	816	No protein	-	lncRNA	-
ENSMUST00000318969.1	AV039307-228	769	No protein	-	lncRNA	-
ENSMUST00000318950.1	AV039307-209	751	No protein	-	lncRNA	-
ENSMUST00000318952.1	AV039307-211	751	No protein	-	lncRNA	-
ENSMUST00000318980.1	AV039307-239	750	No protein	-	lncRNA	-
ENSMUST00000318960.1	AV039307-219	739	No protein	-	lncRNA	-
ENSMUST00000319006.1	AV039307-265	719	No protein	-	lncRNA	-
ENSMUST00000318990.1	AV039307-249	688	No protein	-	lncRNA	-
ENSMUST00000133643.9	AV039307-202	684	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000318985.1	AV039307-244	675	No protein	-	lncRNA	-
ENSMUST00000318954.1	AV039307-213	661	No protein	-	lncRNA	-
ENSMUST00000318964.1	AV039307-223	653	No protein	-	lncRNA	-
ENSMUST00000319000.1	AV039307-259	638	No protein	-	lncRNA	-
ENSMUST00000318956.1	AV039307-215	635	No protein	-	lncRNA	-
ENSMUST00000319007.1	AV039307-266	635	No protein	-	lncRNA	-
ENSMUST00000318972.1	AV039307-231	634	No protein	-	lncRNA	-
ENSMUST00000318995.1	AV039307-254	613	No protein	-	lncRNA	-
ENSMUST00000318974.1	AV039307-233	610	No protein	-	lncRNA	-
ENSMUST00000318961.1	AV039307-220	607	No protein	-	lncRNA	-
ENSMUST00000318998.1	AV039307-257	602	No protein	-	lncRNA	-
ENSMUST00000319003.1	AV039307-262	598	No protein	-	lncRNA	-
ENSMUST00000318991.1	AV039307-250	594	No protein	-	lncRNA	-
ENSMUST00000318953.1	AV039307-212	588	No protein	-	lncRNA	-
ENSMUST00000318962.1	AV039307-221	575	No protein	-	lncRNA	-
ENSMUST00000318949.1	AV039307-208	565	No protein	-	lncRNA	-
ENSMUST00000319009.1	AV039307-268	547	No protein	-	lncRNA	-
ENSMUST00000318992.1	AV039307-251	533	No protein	-	lncRNA	-
ENSMUST00000318982.1	AV039307-241	532	No protein	-	lncRNA	-
ENSMUST00000318984.1	AV039307-243	526	No protein	-	lncRNA	-
ENSMUST00000318996.1	AV039307-255	503	No protein	-	lncRNA	-
ENSMUST00000318993.1	AV039307-252	493	No protein	-	lncRNA	-
ENSMUST00000319010.1	AV039307-269	489	No protein	-	lncRNA	-
ENSMUST00000318948.1	AV039307-207	463	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000318966.1	AV039307-225	463	No protein	-	lncRNA	-
ENSMUST00000318979.1	AV039307-238	463	No protein	-	lncRNA	-
ENSMUST00000318955.1	AV039307-214	455	No protein	-	lncRNA	-
ENSMUST00000318981.1	AV039307-240	452	No protein	-	lncRNA	-
ENSMUST00000318971.1	AV039307-230	440	No protein	-	lncRNA	-
ENSMUST00000318986.1	AV039307-245	440	No protein	-	lncRNA	-
ENSMUST00000318947.1	AV039307-206	432	No protein	-	lncRNA	-
ENSMUST00000318978.1	AV039307-237	403	No protein	-	lncRNA	-
ENSMUST00000318958.1	AV039307-217	391	No protein	-	lncRNA	-
ENSMUST00000318977.1	AV039307-236	385	No protein	-	lncRNA	-
ENSMUST00000318973.1	AV039307-232	343	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000171483.2	AV039307-203	324	No protein	-	lncRNA	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000318997.1	AV039307-256	297	No protein	-	lncRNA	-

Gene: AV039307 ENSMUSG00000087519

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Gene: AV039307 ENSMUSG00000087519

Summary

About Us

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