Gene: AI839979 ENSMUSG00000107355

Description

expressed sequence AI839979 [Source:MGI Symbol;Acc:MGI:2140975]

Location

Chromosome 5: 31,713,677-31,767,890 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 43 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000355551.1	AI839979-207	647	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000200956.3	AI839979-202	6615	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000355577.1	AI839979-233	2025	No protein	-	lncRNA	-
ENSMUST00000355572.1	AI839979-228	1737	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000201790.4	AI839979-203	1648	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000355578.1	AI839979-234	1642	No protein	-	lncRNA	-
ENSMUST00000355571.1	AI839979-227	1634	No protein	-	lncRNA	-
ENSMUST00000200738.4	AI839979-201	1523	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000355570.1	AI839979-226	1477	No protein	-	lncRNA	-
ENSMUST00000355583.1	AI839979-239	1451	No protein	-	lncRNA	-
ENSMUST00000244663.2	AI839979-206	1445	No protein	-	lncRNA	-
ENSMUST00000355563.1	AI839979-219	1367	No protein	-	lncRNA	-
ENSMUST00000355555.1	AI839979-211	1347	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000242417.2	AI839979-204	1194	No protein	-	lncRNA	-
ENSMUST00000355584.1	AI839979-240	1178	No protein	-	lncRNA	-
ENSMUST00000355580.1	AI839979-236	1157	No protein	-	lncRNA	-
ENSMUST00000355581.1	AI839979-237	1136	No protein	-	lncRNA	-
ENSMUST00000355582.1	AI839979-238	1113	No protein	-	lncRNA	-
ENSMUST00000355556.1	AI839979-212	1104	No protein	-	lncRNA	-
ENSMUST00000355559.1	AI839979-215	1080	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000355579.1	AI839979-235	1062	No protein	-	lncRNA	-
ENSMUST00000355554.1	AI839979-210	1035	No protein	-	lncRNA	-
ENSMUST00000355585.1	AI839979-241	1025	No protein	-	lncRNA	-
ENSMUST00000355566.1	AI839979-222	969	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000355561.1	AI839979-217	966	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000355586.1	AI839979-242	880	No protein	-	lncRNA	-
ENSMUST00000355552.1	AI839979-208	834	No protein	-	lncRNA	-
ENSMUST00000355565.1	AI839979-221	827	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000355567.1	AI839979-223	776	No protein	-	lncRNA	-
ENSMUST00000355575.1	AI839979-231	752	No protein	-	lncRNA	-
ENSMUST00000355562.1	AI839979-218	690	No protein	-	lncRNA	-
ENSMUST00000355573.1	AI839979-229	660	No protein	-	lncRNA	-
ENSMUST00000242635.2	AI839979-205	642	No protein	-	lncRNA	-
ENSMUST00000355553.1	AI839979-209	618	No protein	-	lncRNA	-
ENSMUST00000355574.1	AI839979-230	618	No protein	-	lncRNA	-
ENSMUST00000355568.1	AI839979-224	590	No protein	-	lncRNA	-
ENSMUST00000355569.1	AI839979-225	587	No protein	-	lncRNA	-
ENSMUST00000355557.1	AI839979-213	556	No protein	-	lncRNA	-
ENSMUST00000356655.1	AI839979-243	540	No protein	-	lncRNA	-
ENSMUST00000355560.1	AI839979-216	528	No protein	-	lncRNA	-
ENSMUST00000355558.1	AI839979-214	519	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000355564.1	AI839979-220	512	No protein	-	lncRNA	-
ENSMUST00000355576.1	AI839979-232	343	No protein	-	lncRNA	-

Gene: AI839979 ENSMUSG00000107355

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Gene: AI839979 ENSMUSG00000107355

Summary

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