Gene: Mexis ENSMUSG00000086712

Description

macrophage expressed LXRa(NR1H3)-dependent amplifier of Abca1 transcription lncRNA [Source:MGI Symbol;Acc:MGI:2140270]

Gene Synonyms

AI427809, LOC381524

Location

Chromosome 4: 53,261,354-53,339,840 reverse strand.

GRCm39:CM000997.3

About this gene

This gene has 36 transcripts (splice variants) and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000362648.1	Mexis-205	2994	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362678.1	Mexis-235	2162	No protein	-	lncRNA	-
ENSMUST00000362677.1	Mexis-234	2160	No protein	-	lncRNA	-
ENSMUST00000123044.3	Mexis-202	2103	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000123127.4	Mexis-203	2041	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000098075.4	Mexis-201	1893	No protein	-	lncRNA	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000362652.1	Mexis-209	1413	No protein	-	lncRNA	-
ENSMUST00000362672.1	Mexis-229	1236	No protein	-	lncRNA	-
ENSMUST00000362649.1	Mexis-206	1181	No protein	-	lncRNA	-
ENSMUST00000362674.1	Mexis-231	1057	No protein	-	lncRNA	-
ENSMUST00000186737.2	Mexis-204	1024	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000362671.1	Mexis-228	940	No protein	-	lncRNA	-
ENSMUST00000362666.1	Mexis-223	925	No protein	-	lncRNA	-
ENSMUST00000362668.1	Mexis-225	902	No protein	-	lncRNA	-
ENSMUST00000362654.1	Mexis-211	896	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362676.1	Mexis-233	893	No protein	-	lncRNA	-
ENSMUST00000362655.1	Mexis-212	882	No protein	-	lncRNA	-
ENSMUST00000362665.1	Mexis-222	876	No protein	-	lncRNA	-
ENSMUST00000362663.1	Mexis-220	875	No protein	-	lncRNA	-
ENSMUST00000362675.1	Mexis-232	865	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362653.1	Mexis-210	828	No protein	-	lncRNA	-
ENSMUST00000362670.1	Mexis-227	821	No protein	-	lncRNA	-
ENSMUST00000362659.1	Mexis-216	785	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362650.1	Mexis-207	734	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362657.1	Mexis-214	727	No protein	-	lncRNA	-
ENSMUST00000362651.1	Mexis-208	687	No protein	-	lncRNA	-
ENSMUST00000362658.1	Mexis-215	617	No protein	-	lncRNA	-
ENSMUST00000362664.1	Mexis-221	617	No protein	-	lncRNA	-
ENSMUST00000362673.1	Mexis-230	569	No protein	-	lncRNA	-
ENSMUST00000362669.1	Mexis-226	568	No protein	-	lncRNA	-
ENSMUST00000362662.1	Mexis-219	550	No protein	-	lncRNA	-
ENSMUST00000362667.1	Mexis-224	493	No protein	-	lncRNA	-
ENSMUST00000362660.1	Mexis-217	463	No protein	-	lncRNA	-
ENSMUST00000362661.1	Mexis-218	387	No protein	-	lncRNA	-
ENSMUST00000362656.1	Mexis-213	372	No protein	-	lncRNA	-
ENSMUST00000362679.1	Mexis-236	277	No protein	-	lncRNA	-

Gene: Mexis ENSMUSG00000086712

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Gene: Mexis ENSMUSG00000086712

Summary

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