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Gene: A830011K09Rik ENSMUSG00000089957

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Description

RIKEN cDNA A830011K09 gene [Source:MGI Symbol;Acc:MGI:2442570]

Location

Chromosome 6: 138,397,975-138,406,590 forward strand.

GRCm39:CM000999.3

About this gene

This gene has 10 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000162868.2	A830011K09Rik-202	2201	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000367046.1	A830011K09Rik-204	1837	No protein	-	lncRNA		-
ENSMUST00000159822.2	A830011K09Rik-201	1790	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000367047.1	A830011K09Rik-205	1447	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000367051.1	A830011K09Rik-209	958	No protein	-	lncRNA		-
ENSMUST00000367050.1	A830011K09Rik-208	836	No protein	-	lncRNA		-
ENSMUST00000367048.1	A830011K09Rik-206	780	No protein	-	lncRNA		-
ENSMUST00000367049.1	A830011K09Rik-207	666	No protein	-	lncRNA		-
ENSMUST00000203961.2	A830011K09Rik-203	500	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000367052.1	A830011K09Rik-210	435	No protein	-	lncRNA		-

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Summary

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