Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Phenotypes
Genetic Variation
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Molecular interactions
External references
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ID History
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Gene: A230087F16Rik ENSMUSG00000097381

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Description

RIKEN cDNA A230087F16 gene [Source:MGI Symbol;Acc:MGI:2444635]

Location

Chromosome 12: 111,251,144-111,270,262 forward strand.

GRCm39:CM001005.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000286787.1	A230087F16Rik-203	1252	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000181055.3	A230087F16Rik-201	2103	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000286791.1	A230087F16Rik-207	1816	No protein	-	lncRNA		-
ENSMUST00000181561.4	A230087F16Rik-202	1356	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000286788.1	A230087F16Rik-204	1178	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000286796.1	A230087F16Rik-212	1075	No protein	-	lncRNA		-
ENSMUST00000286794.1	A230087F16Rik-210	992	No protein	-	lncRNA		-
ENSMUST00000286792.1	A230087F16Rik-208	965	No protein	-	lncRNA		-
ENSMUST00000286795.1	A230087F16Rik-211	925	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000286793.1	A230087F16Rik-209	901	No protein	-	lncRNA		-
ENSMUST00000286789.1	A230087F16Rik-205	881	No protein	-	lncRNA		-
ENSMUST00000286790.1	A230087F16Rik-206	767	No protein	-	lncRNA		-

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Summary

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