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- Splice variants
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Gene: 9530036O11Rik ENSMUSG00000097726

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Description

RIKEN cDNA 9530036O11Rik [Source:MGI Symbol;Acc:MGI:2444607]

Location

Chromosome 5: 28,663,272-29,138,993 forward strand.

GRCm39:CM000998.3

About this gene

This gene has 19 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000180878.8	9530036O11Rik-201	876	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000181202.2	9530036O11Rik-202	2926	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000379484.1	9530036O11Rik-207	1778	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000379489.1	9530036O11Rik-212	1663	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000379481.1	9530036O11Rik-204	1268	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000379483.1	9530036O11Rik-206	1244	No protein	-	lncRNA		-
ENSMUST00000379493.1	9530036O11Rik-216	1240	No protein	-	lncRNA		-
ENSMUST00000379495.1	9530036O11Rik-218	1181	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000379487.1	9530036O11Rik-210	1142	No protein	-	lncRNA		-
ENSMUST00000379480.1	9530036O11Rik-203	1139	No protein	-	lncRNA		-
ENSMUST00000379485.1	9530036O11Rik-208	1123	No protein	-	lncRNA		-
ENSMUST00000379494.1	9530036O11Rik-217	980	No protein	-	lncRNA		-
ENSMUST00000379490.1	9530036O11Rik-213	975	No protein	-	lncRNA		-
ENSMUST00000379482.1	9530036O11Rik-205	967	No protein	-	lncRNA		-
ENSMUST00000379491.1	9530036O11Rik-214	859	No protein	-	lncRNA		-
ENSMUST00000379488.1	9530036O11Rik-211	775	No protein	-	lncRNA		-
ENSMUST00000379486.1	9530036O11Rik-209	711	No protein	-	lncRNA		-
ENSMUST00000379492.1	9530036O11Rik-215	668	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000379496.1	9530036O11Rik-219	463	No protein	-	lncRNA		-

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Summary

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