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- Splice variants
- Transcript comparison
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Gene: 9430021M05Rik ENSMUSG00000054457

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Description

RIKEN cDNA 9430021M05 gene [Source:MGI Symbol;Acc:MGI:1924538]

Location

Chromosome 2: 162,501,143-162,522,610 forward strand.

GRCm39:CM000995.3

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000252011.1	9430021M05Rik-207	473	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000247333.2	9430021M05Rik-205	2196	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000246903.1	9430021M05Rik-204	2010	No protein	-	lncRNA		-
ENSMUST00000247521.1	9430021M05Rik-206	1691	No protein	-	lncRNA		-
ENSMUST00000145985.4	9430021M05Rik-201	1580	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000241442.1	9430021M05Rik-203	1179	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000252013.1	9430021M05Rik-209	1166	No protein	-	lncRNA		-
ENSMUST00000240841.1	9430021M05Rik-202	1094	No protein	-	lncRNA		-
ENSMUST00000252014.1	9430021M05Rik-210	1040	No protein	-	lncRNA		-
ENSMUST00000252017.1	9430021M05Rik-213	945	No protein	-	lncRNA		-
ENSMUST00000252015.1	9430021M05Rik-211	944	No protein	-	lncRNA		-
ENSMUST00000252016.1	9430021M05Rik-212	919	No protein	-	lncRNA		-
ENSMUST00000252012.1	9430021M05Rik-208	716	No protein	-	lncRNA		-
ENSMUST00000252018.1	9430021M05Rik-214	714	No protein	-	lncRNA		-

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Summary

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