Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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Gene: 9230009I02Rik ENSMUSG00000072982

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Description

RIKEN cDNA 9230009I02 gene [Source:MGI Symbol;Acc:MGI:3588229]

Location

Chromosome 11: 50,975,532-50,982,671 forward strand.

GRCm39:CM001004.3

About this gene

This gene has 6 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000101255.3	9230009I02Rik-201	1536	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000284478.1	9230009I02Rik-203	1274	No protein	-	lncRNA		-
ENSMUST00000284480.1	9230009I02Rik-205	1269	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000284477.1	9230009I02Rik-202	1036	No protein	-	lncRNA		-
ENSMUST00000284479.1	9230009I02Rik-204	767	No protein	-	lncRNA		-
ENSMUST00000284481.1	9230009I02Rik-206	712	No protein	-	lncRNA		-

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Summary

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