Gene: 5830428M24Rik ENSMUSG00000113035

Description

RIKEN cDNA 5830428M24 gene [Source:MGI Symbol;Acc:MGI:1923312]

Gene Synonyms

Gm3007

Location

Chromosome 12: 69,510,946-69,549,389 reverse strand.

GRCm39:CM001005.3

About this gene

This gene has 52 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000222980.3	5830428M24Rik-203	1053	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000222697.3	5830428M24Rik-202	822	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000295742.1	5830428M24Rik-219	685	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000295743.1	5830428M24Rik-220	1972	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000295764.1	5830428M24Rik-241	1437	No protein	-	lncRNA	-
ENSMUST00000240874.2	5830428M24Rik-206	1422	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000242761.2	5830428M24Rik-211	1335	No protein	-	lncRNA	-
ENSMUST00000295758.1	5830428M24Rik-235	1335	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000295767.1	5830428M24Rik-244	1329	No protein	-	lncRNA	-
ENSMUST00000295757.1	5830428M24Rik-234	1328	No protein	-	lncRNA	-
ENSMUST00000245246.2	5830428M24Rik-217	1326	No protein	-	lncRNA	-
ENSMUST00000295748.1	5830428M24Rik-225	1323	No protein	-	lncRNA	-
ENSMUST00000295759.1	5830428M24Rik-236	1320	No protein	-	lncRNA	-
ENSMUST00000243882.1	5830428M24Rik-213	1303	No protein	-	lncRNA	-
ENSMUST00000295766.1	5830428M24Rik-243	1269	No protein	-	lncRNA	-
ENSMUST00000295751.1	5830428M24Rik-228	1260	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000295760.1	5830428M24Rik-237	1232	No protein	-	lncRNA	-
ENSMUST00000295752.1	5830428M24Rik-229	1210	No protein	-	lncRNA	-
ENSMUST00000295761.1	5830428M24Rik-238	1160	No protein	-	lncRNA	-
ENSMUST00000241431.2	5830428M24Rik-208	1147	No protein	-	lncRNA	-
ENSMUST00000295763.1	5830428M24Rik-240	1133	No protein	-	lncRNA	-
ENSMUST00000295772.1	5830428M24Rik-249	1132	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000295754.1	5830428M24Rik-231	1116	No protein	-	lncRNA	-
ENSMUST00000241118.2	5830428M24Rik-207	1103	No protein	-	lncRNA	-
ENSMUST00000295770.1	5830428M24Rik-247	1099	No protein	-	lncRNA	-
ENSMUST00000295755.1	5830428M24Rik-232	1086	No protein	-	lncRNA	-
ENSMUST00000295762.1	5830428M24Rik-239	1086	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000223143.4	5830428M24Rik-204	1077	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000295746.1	5830428M24Rik-223	1048	No protein	-	lncRNA	-
ENSMUST00000245063.2	5830428M24Rik-216	1042	No protein	-	lncRNA	-
ENSMUST00000295745.1	5830428M24Rik-222	1013	No protein	-	lncRNA	-
ENSMUST00000295747.1	5830428M24Rik-224	1007	No protein	-	lncRNA	-
ENSMUST00000242322.2	5830428M24Rik-210	991	No protein	-	lncRNA	-
ENSMUST00000295768.1	5830428M24Rik-245	990	No protein	-	lncRNA	-
ENSMUST00000295744.1	5830428M24Rik-221	963	No protein	-	lncRNA	-
ENSMUST00000295775.1	5830428M24Rik-252	962	No protein	-	lncRNA	-
ENSMUST00000295765.1	5830428M24Rik-242	952	No protein	-	lncRNA	-
ENSMUST00000295771.1	5830428M24Rik-248	939	No protein	-	lncRNA	-
ENSMUST00000241707.2	5830428M24Rik-209	894	No protein	-	lncRNA	-
ENSMUST00000244317.2	5830428M24Rik-215	869	No protein	-	lncRNA	-
ENSMUST00000295769.1	5830428M24Rik-246	831	No protein	-	lncRNA	-
ENSMUST00000243253.2	5830428M24Rik-212	830	No protein	-	lncRNA	-
ENSMUST00000221805.2	5830428M24Rik-201	825	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000295774.1	5830428M24Rik-251	823	No protein	-	lncRNA	-
ENSMUST00000295750.1	5830428M24Rik-227	804	No protein	-	lncRNA	-
ENSMUST00000240794.2	5830428M24Rik-205	774	No protein	-	lncRNA	-
ENSMUST00000295756.1	5830428M24Rik-233	769	No protein	-	lncRNA	-
ENSMUST00000244309.1	5830428M24Rik-214	755	No protein	-	lncRNA	-
ENSMUST00000295749.1	5830428M24Rik-226	747	No protein	-	lncRNA	-
ENSMUST00000246610.2	5830428M24Rik-218	742	No protein	-	lncRNA	-
ENSMUST00000295753.1	5830428M24Rik-230	690	No protein	-	lncRNA	-
ENSMUST00000295773.1	5830428M24Rik-250	668	No protein	-	lncRNA	-

Gene: 5830428M24Rik ENSMUSG00000113035

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Gene: 5830428M24Rik ENSMUSG00000113035

Summary

About Us

Get help

Our sister sites

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