Summary
- Splice variants
- Transcript comparison
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Gene: 5730419F03Rik ENSMUSG00000099364

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Description

RIKEN cDNA 5730419F03 gene [Source:MGI Symbol;Acc:MGI:1917787]

Location

Chromosome 1: 78,536,516-78,607,061 reverse strand.

GRCm39:CM000994.3

About this gene

This gene has 8 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000279984.1	5730419F03Rik-202	812	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000190504.3	5730419F03Rik-201	2091	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000279986.1	5730419F03Rik-204	890	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000279985.1	5730419F03Rik-203	722	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000279988.1	5730419F03Rik-206	609	No protein	-	lncRNA		-
ENSMUST00000279989.1	5730419F03Rik-207	571	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000279987.1	5730419F03Rik-205	485	No protein	-	lncRNA		-
ENSMUST00000279990.1	5730419F03Rik-208	240	No protein	-	lncRNA		-

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Summary

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