Gene: 5430416N02Rik ENSMUSG00000097772

Description

RIKEN cDNA 5430416N02 gene [Source:MGI Symbol;Acc:MGI:1918676]

Gene Synonyms

Gm3514

Location

Chromosome 5: 100,568,367-100,578,234 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 33 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000241282.2	5430416N02Rik-205	1873	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000180779.3	5430416N02Rik-201	3533	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000196399.3	5430416N02Rik-203	2938	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000247109.2	5430416N02Rik-212	1724	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000243438.1	5430416N02Rik-208	1637	No protein	-	lncRNA	-
ENSMUST00000326638.1	5430416N02Rik-220	1632	No protein	-	lncRNA	-
ENSMUST00000181873.10	5430416N02Rik-202	1304	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000242951.2	5430416N02Rik-207	1021	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000326631.1	5430416N02Rik-213	951	No protein	-	lncRNA	-
ENSMUST00000245431.1	5430416N02Rik-211	902	No protein	-	lncRNA	-
ENSMUST00000326642.1	5430416N02Rik-224	864	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000326635.1	5430416N02Rik-217	863	No protein	-	lncRNA	-
ENSMUST00000241561.2	5430416N02Rik-206	838	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244350.2	5430416N02Rik-210	805	No protein	-	lncRNA	-
ENSMUST00000326639.1	5430416N02Rik-221	804	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000326632.1	5430416N02Rik-214	798	No protein	-	lncRNA	-
ENSMUST00000326633.1	5430416N02Rik-215	738	No protein	-	lncRNA	-
ENSMUST00000326645.1	5430416N02Rik-227	726	No protein	-	lncRNA	-
ENSMUST00000243530.2	5430416N02Rik-209	672	No protein	-	lncRNA	-
ENSMUST00000326634.1	5430416N02Rik-216	659	No protein	-	lncRNA	-
ENSMUST00000326646.1	5430416N02Rik-228	638	No protein	-	lncRNA	-
ENSMUST00000326641.1	5430416N02Rik-223	627	No protein	-	lncRNA	-
ENSMUST00000326649.1	5430416N02Rik-231	606	No protein	-	lncRNA	-
ENSMUST00000326636.1	5430416N02Rik-218	597	No protein	-	lncRNA	-
ENSMUST00000326648.1	5430416N02Rik-230	588	No protein	-	lncRNA	-
ENSMUST00000326651.1	5430416N02Rik-233	587	No protein	-	lncRNA	-
ENSMUST00000326637.1	5430416N02Rik-219	563	No protein	-	lncRNA	-
ENSMUST00000326640.1	5430416N02Rik-222	536	No protein	-	lncRNA	-
ENSMUST00000326643.1	5430416N02Rik-225	464	No protein	-	lncRNA	-
ENSMUST00000326644.1	5430416N02Rik-226	460	No protein	-	lncRNA	-
ENSMUST00000326650.1	5430416N02Rik-232	453	No protein	-	lncRNA	-
ENSMUST00000198522.2	5430416N02Rik-204	435	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000326647.1	5430416N02Rik-229	352	No protein	-	lncRNA	-

Gene: 5430416N02Rik ENSMUSG00000097772

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Gene: 5430416N02Rik ENSMUSG00000097772

Summary

About Us

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