Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: 4933436H12Rik ENSMUSG00000108924

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Description

RIKEN cDNA 4933436H12 gene [Source:MGI Symbol;Acc:MGI:1918494]

Location

Chromosome 7: 68,067,119-68,077,110 forward strand.

GRCm39:CM001000.3

About this gene

This gene has 15 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000207818.2	4933436H12Rik-203	1466	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000208150.3	4933436H12Rik-204	1556	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000359085.1	4933436H12Rik-211	1043	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000359082.1	4933436H12Rik-208	1018	No protein	-	lncRNA		-
ENSMUST00000359089.1	4933436H12Rik-215	1012	No protein	-	lncRNA		-
ENSMUST00000359086.1	4933436H12Rik-212	959	No protein	-	lncRNA		-
ENSMUST00000359084.1	4933436H12Rik-210	953	No protein	-	lncRNA		-
ENSMUST00000359088.1	4933436H12Rik-214	899	No protein	-	lncRNA		-
ENSMUST00000359087.1	4933436H12Rik-213	849	No protein	-	lncRNA		-
ENSMUST00000359081.1	4933436H12Rik-207	825	No protein	-	lncRNA		-
ENSMUST00000359083.1	4933436H12Rik-209	787	No protein	-	lncRNA		-
ENSMUST00000359079.1	4933436H12Rik-205	779	No protein	-	lncRNA		-
ENSMUST00000207304.3	4933436H12Rik-201	694	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000207558.2	4933436H12Rik-202	673	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000359080.1	4933436H12Rik-206	654	No protein	-	lncRNA		-

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Summary

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