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- Splice variants
- Transcript comparison
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Gene: 4933416O17Rik ENSMUSG00000113802

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Description

RIKEN cDNA 4933416O17 gene [Source:MGI Symbol;Acc:MGI:1914800]

Location

Chromosome 13: 70,095,024-70,136,373 forward strand.

GRCm39:CM001006.3

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000358415.1	4933416O17Rik-202	2355	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000358420.1	4933416O17Rik-207	2245	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000220972.3	4933416O17Rik-201	2150	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000358421.1	4933416O17Rik-208	990	No protein	-	lncRNA		-
ENSMUST00000358424.1	4933416O17Rik-211	922	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000358423.1	4933416O17Rik-210	863	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000358418.1	4933416O17Rik-205	856	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000358417.1	4933416O17Rik-204	819	No protein	-	lncRNA		-
ENSMUST00000358422.1	4933416O17Rik-209	658	No protein	-	lncRNA		-
ENSMUST00000358416.1	4933416O17Rik-203	612	No protein	-	lncRNA		-
ENSMUST00000358419.1	4933416O17Rik-206	591	No protein	-	lncRNA		-
ENSMUST00000358426.1	4933416O17Rik-213	559	No protein	-	lncRNA		-
ENSMUST00000358425.1	4933416O17Rik-212	380	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000358427.1	4933416O17Rik-214	298	No protein	-	lncRNA		-

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Summary

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