Gene: 4933407K13Rik ENSMUSG00000087396

Description

RIKEN cDNA 4933407K13 gene [Source:MGI Symbol;Acc:MGI:1921646]

Location

Chromosome X: 74,750,538-74,808,347 reverse strand.

GRCm39:CM001013.3

About this gene

This gene has 81 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000138943.8	4933407K13Rik-203	4364	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000130744.10	4933407K13Rik-202	3379	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000240820.1	4933407K13Rik-206	3221	No protein	-	lncRNA	-
ENSMUST00000245205.1	4933407K13Rik-218	2993	No protein	-	lncRNA	-
ENSMUST00000245187.2	4933407K13Rik-217	2517	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000330860.1	4933407K13Rik-221	2292	No protein	-	lncRNA	-
ENSMUST00000241972.2	4933407K13Rik-208	2237	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244802.2	4933407K13Rik-215	2197	No protein	-	lncRNA	-
ENSMUST00000330861.1	4933407K13Rik-222	2079	No protein	-	lncRNA	-
ENSMUST00000244710.2	4933407K13Rik-214	2061	No protein	-	lncRNA	-
ENSMUST00000245294.1	4933407K13Rik-219	1993	No protein	-	lncRNA	-
ENSMUST00000244394.1	4933407K13Rik-212	1991	No protein	-	lncRNA	-
ENSMUST00000244534.2	4933407K13Rik-213	1918	No protein	-	lncRNA	-
ENSMUST00000330863.1	4933407K13Rik-224	1897	No protein	-	lncRNA	-
ENSMUST00000244981.1	4933407K13Rik-216	1855	No protein	-	lncRNA	-
ENSMUST00000330868.1	4933407K13Rik-229	1741	No protein	-	lncRNA	-
ENSMUST00000241054.1	4933407K13Rik-207	1699	No protein	-	lncRNA	-
ENSMUST00000242475.2	4933407K13Rik-210	1681	No protein	-	lncRNA	-
ENSMUST00000330875.1	4933407K13Rik-236	1640	No protein	-	lncRNA	-
ENSMUST00000330870.1	4933407K13Rik-231	1605	No protein	-	lncRNA	-
ENSMUST00000330901.1	4933407K13Rik-262	1598	No protein	-	lncRNA	-
ENSMUST00000330873.1	4933407K13Rik-234	1495	No protein	-	lncRNA	-
ENSMUST00000330874.1	4933407K13Rik-235	1490	No protein	-	lncRNA	-
ENSMUST00000330882.1	4933407K13Rik-243	1486	No protein	-	lncRNA	-
ENSMUST00000330914.1	4933407K13Rik-275	1453	No protein	-	lncRNA	-
ENSMUST00000330865.1	4933407K13Rik-226	1449	No protein	-	lncRNA	-
ENSMUST00000330862.1	4933407K13Rik-223	1417	No protein	-	lncRNA	-
ENSMUST00000244320.1	4933407K13Rik-211	1346	No protein	-	lncRNA	-
ENSMUST00000330859.1	4933407K13Rik-220	1341	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000330879.1	4933407K13Rik-240	1339	No protein	-	lncRNA	-
ENSMUST00000330880.1	4933407K13Rik-241	1331	No protein	-	lncRNA	-
ENSMUST00000330887.1	4933407K13Rik-248	1314	No protein	-	lncRNA	-
ENSMUST00000330897.1	4933407K13Rik-258	1314	No protein	-	lncRNA	-
ENSMUST00000330876.1	4933407K13Rik-237	1313	No protein	-	lncRNA	-
ENSMUST00000330871.1	4933407K13Rik-232	1289	No protein	-	lncRNA	-
ENSMUST00000129980.8	4933407K13Rik-201	1243	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000242014.1	4933407K13Rik-209	1226	No protein	-	lncRNA	-
ENSMUST00000330864.1	4933407K13Rik-225	1226	No protein	-	lncRNA	-
ENSMUST00000330872.1	4933407K13Rik-233	1215	No protein	-	lncRNA	-
ENSMUST00000330905.1	4933407K13Rik-266	1201	No protein	-	lncRNA	-
ENSMUST00000330909.1	4933407K13Rik-270	1201	No protein	-	lncRNA	-
ENSMUST00000330910.1	4933407K13Rik-271	1193	No protein	-	lncRNA	-
ENSMUST00000330885.1	4933407K13Rik-246	1168	No protein	-	lncRNA	-
ENSMUST00000330886.1	4933407K13Rik-247	1164	No protein	-	lncRNA	-
ENSMUST00000330884.1	4933407K13Rik-245	1159	No protein	-	lncRNA	-
ENSMUST00000330896.1	4933407K13Rik-257	1155	No protein	-	lncRNA	-
ENSMUST00000330913.1	4933407K13Rik-274	1129	No protein	-	lncRNA	-
ENSMUST00000330877.1	4933407K13Rik-238	1045	No protein	-	lncRNA	-
ENSMUST00000330908.1	4933407K13Rik-269	1034	No protein	-	lncRNA	-
ENSMUST00000330894.1	4933407K13Rik-255	998	No protein	-	lncRNA	-
ENSMUST00000330883.1	4933407K13Rik-244	997	No protein	-	lncRNA	-
ENSMUST00000330895.1	4933407K13Rik-256	997	No protein	-	lncRNA	-
ENSMUST00000330904.1	4933407K13Rik-265	997	No protein	-	lncRNA	-
ENSMUST00000330918.1	4933407K13Rik-279	986	No protein	-	lncRNA	-
ENSMUST00000330906.1	4933407K13Rik-267	972	No protein	-	lncRNA	-
ENSMUST00000330878.1	4933407K13Rik-239	957	No protein	-	lncRNA	-
ENSMUST00000330888.1	4933407K13Rik-249	940	No protein	-	lncRNA	-
ENSMUST00000330903.1	4933407K13Rik-264	873	No protein	-	lncRNA	-
ENSMUST00000330893.1	4933407K13Rik-254	845	No protein	-	lncRNA	-
ENSMUST00000140409.2	4933407K13Rik-204	839	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000330881.1	4933407K13Rik-242	839	No protein	-	lncRNA	-
ENSMUST00000330907.1	4933407K13Rik-268	839	No protein	-	lncRNA	-
ENSMUST00000330916.1	4933407K13Rik-277	814	No protein	-	lncRNA	-
ENSMUST00000330900.1	4933407K13Rik-261	807	No protein	-	lncRNA	-
ENSMUST00000330920.1	4933407K13Rik-281	806	No protein	-	lncRNA	-
ENSMUST00000330866.1	4933407K13Rik-227	791	No protein	-	lncRNA	-
ENSMUST00000330867.1	4933407K13Rik-228	791	No protein	-	lncRNA	-
ENSMUST00000330919.1	4933407K13Rik-280	789	No protein	-	lncRNA	-
ENSMUST00000151267.2	4933407K13Rik-205	693	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000330912.1	4933407K13Rik-273	651	No protein	-	lncRNA	-
ENSMUST00000330891.1	4933407K13Rik-252	634	No protein	-	lncRNA	-
ENSMUST00000330898.1	4933407K13Rik-259	621	No protein	-	lncRNA	-
ENSMUST00000330869.1	4933407K13Rik-230	596	No protein	-	lncRNA	-
ENSMUST00000330902.1	4933407K13Rik-263	590	No protein	-	lncRNA	-
ENSMUST00000330890.1	4933407K13Rik-251	578	No protein	-	lncRNA	-
ENSMUST00000330917.1	4933407K13Rik-278	575	No protein	-	lncRNA	-
ENSMUST00000330899.1	4933407K13Rik-260	557	No protein	-	lncRNA	-
ENSMUST00000330915.1	4933407K13Rik-276	452	No protein	-	lncRNA	-
ENSMUST00000330911.1	4933407K13Rik-272	434	No protein	-	lncRNA	-
ENSMUST00000330889.1	4933407K13Rik-250	416	No protein	-	lncRNA	-
ENSMUST00000330892.1	4933407K13Rik-253	414	No protein	-	lncRNA	-

Gene: 4933407K13Rik ENSMUSG00000087396

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Gene: 4933407K13Rik ENSMUSG00000087396

Summary

About Us

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