Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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Molecular interactions
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ID History
- Gene history

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Gene: 4930506C21Rik ENSMUSG00000087478

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Description

RIKEN cDNA 4930506C21 gene [Source:MGI Symbol;Acc:MGI:1922310]

Location

Chromosome 17: 8,511,816-8,529,912 reverse strand.

GRCm39:CM001010.3

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000123341.2	4930506C21Rik-202	1193	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000255336.1	4930506C21Rik-206	1503	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000255341.1	4930506C21Rik-211	1428	No protein	-	lncRNA		-
ENSMUST00000244163.1	4930506C21Rik-204	1303	No protein	-	lncRNA		-
ENSMUST00000255340.1	4930506C21Rik-210	1223	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000130639.2	4930506C21Rik-203	909	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000123009.4	4930506C21Rik-201	868	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000255343.1	4930506C21Rik-213	743	No protein	-	lncRNA		-
ENSMUST00000255337.1	4930506C21Rik-207	716	No protein	-	lncRNA		-
ENSMUST00000255338.1	4930506C21Rik-208	716	No protein	-	lncRNA		-
ENSMUST00000255344.1	4930506C21Rik-214	695	No protein	-	lncRNA		-
ENSMUST00000244203.2	4930506C21Rik-205	653	No protein	-	lncRNA		-
ENSMUST00000255342.1	4930506C21Rik-212	579	No protein	-	lncRNA		-
ENSMUST00000255339.1	4930506C21Rik-209	491	No protein	-	lncRNA		-

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Summary

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