Summary
- Splice variants
- Transcript comparison
- Gene alleles
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- Orthologues
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Gene: 4930505A04Rik ENSMUSG00000040919

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Description

RIKEN cDNA 4930505A04 gene [Source:MGI Symbol;Acc:MGI:1922337]

Location

Chromosome 11: 30,376,006-30,421,827 reverse strand.

GRCm39:CM001004.3

About this gene

This gene has 2 transcripts (splice variants), 112 orthologues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000041763.14	4930505A04Rik-201	904	233aa	ENSMUSP00000045288.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48764	Q5SPV6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000152718.2	4930505A04Rik-202	990	105aa	ENSMUSP00000117004.2	Nonsense mediated decay		F2Z426	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

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Summary

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