Summary
- Splice variants
- Transcript comparison
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Gene: 4930433N12Rik ENSMUSG00000042360

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Description

RIKEN cDNA 4930433N12 gene [Source:MGI Symbol;Acc:MGI:2149746]

Location

Chromosome 9: 3,133,847-3,199,885 reverse strand.

GRCm39:CM001002.3

About this gene

This gene has 15 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000188577.3	4930433N12Rik-202	2492	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000048921.13	4930433N12Rik-201	1204	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000352639.1	4930433N12Rik-203	2265	No protein	-	lncRNA		-
ENSMUST00000352640.1	4930433N12Rik-204	1639	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000352643.1	4930433N12Rik-207	1388	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000352645.1	4930433N12Rik-209	1288	No protein	-	lncRNA		-
ENSMUST00000352644.1	4930433N12Rik-208	1140	No protein	-	lncRNA		-
ENSMUST00000352646.1	4930433N12Rik-210	1087	No protein	-	lncRNA		-
ENSMUST00000352641.1	4930433N12Rik-205	1050	No protein	-	lncRNA		-
ENSMUST00000352642.1	4930433N12Rik-206	1050	No protein	-	lncRNA		-
ENSMUST00000352648.1	4930433N12Rik-212	932	No protein	-	lncRNA		-
ENSMUST00000352649.1	4930433N12Rik-213	828	No protein	-	lncRNA		-
ENSMUST00000352647.1	4930433N12Rik-211	542	No protein	-	lncRNA		-
ENSMUST00000352650.1	4930433N12Rik-214	479	No protein	-	lncRNA		-
ENSMUST00000352651.1	4930433N12Rik-215	407	No protein	-	lncRNA		-

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Summary

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