Gene: 4930417H01Rik ENSMUSG00000087017

Description

RIKEN cDNA 4930417H01 gene [Source:MGI Symbol;Acc:MGI:3041209]

Location

Chromosome 2: 122,542,835-122,569,552 forward strand.

GRCm39:CM000995.3

About this gene

This gene has 80 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000153728.9	4930417H01Rik-205	960	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000259561.1	4930417H01Rik-225	2054	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000259543.1	4930417H01Rik-207	1612	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000259544.1	4930417H01Rik-208	1522	No protein	-	lncRNA	-
ENSMUST00000123403.3	4930417H01Rik-201	1471	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000259552.1	4930417H01Rik-216	1429	No protein	-	lncRNA	-
ENSMUST00000259553.1	4930417H01Rik-217	1312	No protein	-	lncRNA	-
ENSMUST00000259611.1	4930417H01Rik-275	1311	No protein	-	lncRNA	-
ENSMUST00000259548.1	4930417H01Rik-212	1153	No protein	-	lncRNA	-
ENSMUST00000259593.1	4930417H01Rik-257	1026	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000148977.9	4930417H01Rik-204	925	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000259588.1	4930417H01Rik-252	913	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000142323.9	4930417H01Rik-203	889	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000259568.1	4930417H01Rik-232	868	No protein	-	lncRNA	-
ENSMUST00000259591.1	4930417H01Rik-255	867	No protein	-	lncRNA	-
ENSMUST00000259545.1	4930417H01Rik-209	829	No protein	-	lncRNA	-
ENSMUST00000259557.1	4930417H01Rik-221	828	No protein	-	lncRNA	-
ENSMUST00000259579.1	4930417H01Rik-243	817	No protein	-	lncRNA	-
ENSMUST00000259583.1	4930417H01Rik-247	807	No protein	-	lncRNA	-
ENSMUST00000259547.1	4930417H01Rik-211	798	No protein	-	lncRNA	-
ENSMUST00000259598.1	4930417H01Rik-262	798	No protein	-	lncRNA	-
ENSMUST00000259580.1	4930417H01Rik-244	795	No protein	-	lncRNA	-
ENSMUST00000259601.1	4930417H01Rik-265	734	No protein	-	lncRNA	-
ENSMUST00000259546.1	4930417H01Rik-210	725	No protein	-	lncRNA	-
ENSMUST00000259549.1	4930417H01Rik-213	701	No protein	-	lncRNA	-
ENSMUST00000259560.1	4930417H01Rik-224	701	No protein	-	lncRNA	-
ENSMUST00000259559.1	4930417H01Rik-223	694	No protein	-	lncRNA	-
ENSMUST00000259572.1	4930417H01Rik-236	662	No protein	-	lncRNA	-
ENSMUST00000259570.1	4930417H01Rik-234	654	No protein	-	lncRNA	-
ENSMUST00000155018.3	4930417H01Rik-206	653	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000259554.1	4930417H01Rik-218	651	No protein	-	lncRNA	-
ENSMUST00000259597.1	4930417H01Rik-261	640	No protein	-	lncRNA	-
ENSMUST00000259550.1	4930417H01Rik-214	635	No protein	-	lncRNA	-
ENSMUST00000259569.1	4930417H01Rik-233	625	No protein	-	lncRNA	-
ENSMUST00000259551.1	4930417H01Rik-215	619	No protein	-	lncRNA	-
ENSMUST00000259582.1	4930417H01Rik-246	611	No protein	-	lncRNA	-
ENSMUST00000259589.1	4930417H01Rik-253	605	No protein	-	lncRNA	-
ENSMUST00000259594.1	4930417H01Rik-258	604	No protein	-	lncRNA	-
ENSMUST00000134411.8	4930417H01Rik-202	589	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000259609.1	4930417H01Rik-273	561	No protein	-	lncRNA	-
ENSMUST00000259558.1	4930417H01Rik-222	559	No protein	-	lncRNA	-
ENSMUST00000259576.1	4930417H01Rik-240	555	No protein	-	lncRNA	-
ENSMUST00000259596.1	4930417H01Rik-260	555	No protein	-	lncRNA	-
ENSMUST00000259564.1	4930417H01Rik-228	538	No protein	-	lncRNA	-
ENSMUST00000259600.1	4930417H01Rik-264	537	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000259592.1	4930417H01Rik-256	534	No protein	-	lncRNA	-
ENSMUST00000259612.1	4930417H01Rik-276	534	No protein	-	lncRNA	-
ENSMUST00000259595.1	4930417H01Rik-259	533	No protein	-	lncRNA	-
ENSMUST00000259610.1	4930417H01Rik-274	528	No protein	-	lncRNA	-
ENSMUST00000259590.1	4930417H01Rik-254	525	No protein	-	lncRNA	-
ENSMUST00000259571.1	4930417H01Rik-235	511	No protein	-	lncRNA	-
ENSMUST00000259606.1	4930417H01Rik-270	502	No protein	-	lncRNA	-
ENSMUST00000259602.1	4930417H01Rik-266	500	No protein	-	lncRNA	-
ENSMUST00000259574.1	4930417H01Rik-238	484	No protein	-	lncRNA	-
ENSMUST00000259577.1	4930417H01Rik-241	482	No protein	-	lncRNA	-
ENSMUST00000259562.1	4930417H01Rik-226	478	No protein	-	lncRNA	-
ENSMUST00000259605.1	4930417H01Rik-269	456	No protein	-	lncRNA	-
ENSMUST00000259604.1	4930417H01Rik-268	450	No protein	-	lncRNA	-
ENSMUST00000259565.1	4930417H01Rik-229	449	No protein	-	lncRNA	-
ENSMUST00000259578.1	4930417H01Rik-242	449	No protein	-	lncRNA	-
ENSMUST00000259614.1	4930417H01Rik-278	447	No protein	-	lncRNA	-
ENSMUST00000259586.1	4930417H01Rik-250	440	No protein	-	lncRNA	-
ENSMUST00000259563.1	4930417H01Rik-227	439	No protein	-	lncRNA	-
ENSMUST00000259581.1	4930417H01Rik-245	430	No protein	-	lncRNA	-
ENSMUST00000259566.1	4930417H01Rik-230	429	No protein	-	lncRNA	-
ENSMUST00000259608.1	4930417H01Rik-272	410	No protein	-	lncRNA	-
ENSMUST00000259556.1	4930417H01Rik-220	395	No protein	-	lncRNA	-
ENSMUST00000259587.1	4930417H01Rik-251	392	No protein	-	lncRNA	-
ENSMUST00000259603.1	4930417H01Rik-267	385	No protein	-	lncRNA	-
ENSMUST00000259599.1	4930417H01Rik-263	382	No protein	-	lncRNA	-
ENSMUST00000259613.1	4930417H01Rik-277	380	No protein	-	lncRNA	-
ENSMUST00000259575.1	4930417H01Rik-239	379	No protein	-	lncRNA	-
ENSMUST00000259555.1	4930417H01Rik-219	378	No protein	-	lncRNA	-
ENSMUST00000259584.1	4930417H01Rik-248	368	No protein	-	lncRNA	-
ENSMUST00000259567.1	4930417H01Rik-231	367	No protein	-	lncRNA	-
ENSMUST00000259607.1	4930417H01Rik-271	363	No protein	-	lncRNA	-
ENSMUST00000259585.1	4930417H01Rik-249	350	No protein	-	lncRNA	-
ENSMUST00000259615.1	4930417H01Rik-279	336	No protein	-	lncRNA	-
ENSMUST00000259616.1	4930417H01Rik-280	327	No protein	-	lncRNA	-
ENSMUST00000259573.1	4930417H01Rik-237	317	No protein	-	lncRNA	-

Gene: 4930417H01Rik ENSMUSG00000087017

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Gene: 4930417H01Rik ENSMUSG00000087017

Summary

About Us

Get help

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