Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: 2700069I18Rik ENSMUSG00000086224

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Description

RIKEN cDNA 2700069I18 gene [Source:MGI Symbol;Acc:MGI:1919858]

Location

Chromosome 3: 5,242,595-5,286,170 reverse strand.

GRCm39:CM000996.3

About this gene

This gene has 11 transcripts (splice variants) and 2 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000128815.10	2700069I18Rik-201	1358	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000314309.1	2700069I18Rik-210	2207	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000314310.1	2700069I18Rik-211	1519	No protein	-	lncRNA		-
ENSMUST00000314302.1	2700069I18Rik-203	967	No protein	-	lncRNA		-
ENSMUST00000314308.1	2700069I18Rik-209	950	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000314303.1	2700069I18Rik-204	944	No protein	-	lncRNA		-
ENSMUST00000314305.1	2700069I18Rik-206	855	No protein	-	lncRNA		-
ENSMUST00000314304.1	2700069I18Rik-205	853	No protein	-	lncRNA		-
ENSMUST00000314306.1	2700069I18Rik-207	751	No protein	-	lncRNA		-
ENSMUST00000177440.3	2700069I18Rik-202	694	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000314307.1	2700069I18Rik-208	532	No protein	-	lncRNA		-

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Summary

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