Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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Molecular interactions
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ID History
- Gene history

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Gene: 2310034O05Rik ENSMUSG00000100157

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Description

RIKEN cDNA 2310034O05 gene [Source:MGI Symbol;Acc:MGI:1916821]

Location

Chromosome 5: 100,344,404-100,368,917 forward strand.

GRCm39:CM000998.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000380232.1	2310034O05Rik-205	959	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000194154.2	2310034O05Rik-203	2116	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000380242.1	2310034O05Rik-215	2113	No protein	-	lncRNA		-
ENSMUST00000188902.4	2310034O05Rik-202	1880	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000380235.1	2310034O05Rik-208	1825	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000380233.1	2310034O05Rik-206	1670	No protein	-	lncRNA		-
ENSMUST00000380237.1	2310034O05Rik-210	1642	No protein	-	lncRNA		-
ENSMUST00000380240.1	2310034O05Rik-213	1423	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000380243.1	2310034O05Rik-216	1309	No protein	-	lncRNA		-
ENSMUST00000185221.9	2310034O05Rik-201	1133	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000380241.1	2310034O05Rik-214	1107	No protein	-	lncRNA		-
ENSMUST00000380234.1	2310034O05Rik-207	1102	No protein	-	lncRNA		-
ENSMUST00000380236.1	2310034O05Rik-209	923	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000380572.1	2310034O05Rik-217	671	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000380573.1	2310034O05Rik-218	652	No protein	-	lncRNA		-
ENSMUST00000247130.2	2310034O05Rik-204	621	No protein	-	lncRNA		-
ENSMUST00000380238.1	2310034O05Rik-211	461	No protein	-	lncRNA		-
ENSMUST00000380239.1	2310034O05Rik-212	397	No protein	-	lncRNA		-

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Summary

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