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- Splice variants
- Transcript comparison
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Gene: 1810013D15Rik ENSMUSG00000028177

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Description

RIKEN cDNA 1810013D15 gene [Source:MGI Symbol;Acc:MGI:1916292]

Location

Chromosome 3: 157,630,845-157,643,992 forward strand.

GRCm39:CM000996.3

About this gene

This gene has 10 transcripts (splice variants) and 2 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000196971.2	1810013D15Rik-202	1450	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000278732.1	1810013D15Rik-208	1386	No protein	-	lncRNA		-
ENSMUST00000198623.5	1810013D15Rik-203	1311	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000278730.1	1810013D15Rik-206	1046	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000278733.1	1810013D15Rik-209	932	No protein	-	lncRNA		-
ENSMUST00000278728.1	1810013D15Rik-204	814	No protein	-	lncRNA		-
ENSMUST00000278729.1	1810013D15Rik-205	801	No protein	-	lncRNA		-
ENSMUST00000278731.1	1810013D15Rik-207	770	No protein	-	lncRNA		-
ENSMUST00000148898.2	1810013D15Rik-201	574	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000278734.1	1810013D15Rik-210	442	No protein	-	lncRNA		-

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Summary

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