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Gene: 1810006J02Rik ENSMUSG00000100182

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Description

RIKEN cDNA 1810006J02 gene [Source:MGI Symbol;Acc:MGI:1916280]

Location

Chromosome 1: 98,059,140-98,073,990 forward strand.

GRCm39:CM000994.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000270125.1	1810006J02Rik-206	905	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000241580.2	1810006J02Rik-204	1861	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000270127.1	1810006J02Rik-208	1780	No protein	-	lncRNA		-
ENSMUST00000270129.1	1810006J02Rik-210	1768	No protein	-	lncRNA		-
ENSMUST00000186473.3	1810006J02Rik-201	1704	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000191060.9	1810006J02Rik-202	1358	No protein	-	lncRNA		TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000270128.1	1810006J02Rik-209	1326	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000270130.1	1810006J02Rik-211	1255	No protein	-	lncRNA		-
ENSMUST00000270136.1	1810006J02Rik-217	1142	No protein	-	lncRNA		-
ENSMUST00000270134.1	1810006J02Rik-215	1088	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000270132.1	1810006J02Rik-213	1044	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000270135.1	1810006J02Rik-216	997	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000270126.1	1810006J02Rik-207	927	No protein	-	lncRNA		-
ENSMUST00000270133.1	1810006J02Rik-214	888	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000243306.2	1810006J02Rik-205	872	No protein	-	lncRNA		-
ENSMUST00000241213.2	1810006J02Rik-203	834	No protein	-	lncRNA		-
ENSMUST00000270137.1	1810006J02Rik-218	767	No protein	-	lncRNA		-
ENSMUST00000270131.1	1810006J02Rik-212	586	No protein	-	lncRNA		-

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Summary

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