Gene: 1700123M08Rik ENSMUSG00000085614

Description

RIKEN cDNA 1700123M08 gene [Source:MGI Symbol;Acc:MGI:1923915]

Location

Chromosome 4: 11,966,514-12,016,734 forward strand.

GRCm39:CM000997.3

About this gene

This gene has 59 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000342483.1	1700123M08Rik-213	1557	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244302.1	1700123M08Rik-209	2280	No protein	-	lncRNA	-
ENSMUST00000342486.1	1700123M08Rik-216	2186	No protein	-	lncRNA	-
ENSMUST00000342514.1	1700123M08Rik-244	2085	No protein	-	lncRNA	-
ENSMUST00000342512.1	1700123M08Rik-242	1881	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000342515.1	1700123M08Rik-245	1695	No protein	-	lncRNA	-
ENSMUST00000342494.1	1700123M08Rik-224	1672	No protein	-	lncRNA	-
ENSMUST00000342500.1	1700123M08Rik-230	1662	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000342485.1	1700123M08Rik-215	1510	No protein	-	lncRNA	-
ENSMUST00000342507.1	1700123M08Rik-237	1506	No protein	-	lncRNA	-
ENSMUST00000244755.2	1700123M08Rik-210	1505	No protein	-	lncRNA	-
ENSMUST00000342499.1	1700123M08Rik-229	1504	No protein	-	lncRNA	-
ENSMUST00000243109.2	1700123M08Rik-208	1433	No protein	-	lncRNA	-
ENSMUST00000241348.2	1700123M08Rik-204	1418	No protein	-	lncRNA	-
ENSMUST00000342513.1	1700123M08Rik-243	1343	No protein	-	lncRNA	-
ENSMUST00000342492.1	1700123M08Rik-222	1321	No protein	-	lncRNA	-
ENSMUST00000146154.3	1700123M08Rik-202	1309	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000342517.1	1700123M08Rik-247	1282	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000342484.1	1700123M08Rik-214	1277	No protein	-	lncRNA	-
ENSMUST00000342508.1	1700123M08Rik-238	1263	No protein	-	lncRNA	-
ENSMUST00000342511.1	1700123M08Rik-241	1261	No protein	-	lncRNA	-
ENSMUST00000342491.1	1700123M08Rik-221	1205	No protein	-	lncRNA	-
ENSMUST00000342495.1	1700123M08Rik-225	1161	No protein	-	lncRNA	-
ENSMUST00000342497.1	1700123M08Rik-227	1139	No protein	-	lncRNA	-
ENSMUST00000342503.1	1700123M08Rik-233	1128	No protein	-	lncRNA	-
ENSMUST00000242177.2	1700123M08Rik-207	1104	No protein	-	lncRNA	-
ENSMUST00000128443.4	1700123M08Rik-201	1092	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000245254.2	1700123M08Rik-212	1074	No protein	-	lncRNA	-
ENSMUST00000241690.2	1700123M08Rik-205	1064	No protein	-	lncRNA	-
ENSMUST00000342510.1	1700123M08Rik-240	1061	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000342489.1	1700123M08Rik-219	1056	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000342504.1	1700123M08Rik-234	988	No protein	-	lncRNA	-
ENSMUST00000241838.1	1700123M08Rik-206	986	No protein	-	lncRNA	-
ENSMUST00000342519.1	1700123M08Rik-249	984	No protein	-	lncRNA	-
ENSMUST00000342493.1	1700123M08Rik-223	969	No protein	-	lncRNA	-
ENSMUST00000154194.4	1700123M08Rik-203	961	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000342522.1	1700123M08Rik-252	943	No protein	-	lncRNA	-
ENSMUST00000342490.1	1700123M08Rik-220	916	No protein	-	lncRNA	-
ENSMUST00000342488.1	1700123M08Rik-218	915	No protein	-	lncRNA	-
ENSMUST00000342506.1	1700123M08Rik-236	883	No protein	-	lncRNA	-
ENSMUST00000342502.1	1700123M08Rik-232	861	No protein	-	lncRNA	-
ENSMUST00000342521.1	1700123M08Rik-251	861	No protein	-	lncRNA	-
ENSMUST00000342518.1	1700123M08Rik-248	857	No protein	-	lncRNA	-
ENSMUST00000342498.1	1700123M08Rik-228	819	No protein	-	lncRNA	-
ENSMUST00000342487.1	1700123M08Rik-217	785	No protein	-	lncRNA	-
ENSMUST00000342501.1	1700123M08Rik-231	785	No protein	-	lncRNA	-
ENSMUST00000342505.1	1700123M08Rik-235	775	No protein	-	lncRNA	-
ENSMUST00000342528.1	1700123M08Rik-258	769	No protein	-	lncRNA	-
ENSMUST00000342520.1	1700123M08Rik-250	703	No protein	-	lncRNA	-
ENSMUST00000342524.1	1700123M08Rik-254	687	No protein	-	lncRNA	-
ENSMUST00000342509.1	1700123M08Rik-239	632	No protein	-	lncRNA	-
ENSMUST00000342496.1	1700123M08Rik-226	536	No protein	-	lncRNA	-
ENSMUST00000342523.1	1700123M08Rik-253	530	No protein	-	lncRNA	-
ENSMUST00000244815.1	1700123M08Rik-211	529	No protein	-	lncRNA	-
ENSMUST00000342525.1	1700123M08Rik-255	503	No protein	-	lncRNA	-
ENSMUST00000342526.1	1700123M08Rik-256	496	No protein	-	lncRNA	-
ENSMUST00000342527.1	1700123M08Rik-257	455	No protein	-	lncRNA	-
ENSMUST00000342529.1	1700123M08Rik-259	450	No protein	-	lncRNA	-
ENSMUST00000342516.1	1700123M08Rik-246	294	No protein	-	lncRNA	-

Gene: 1700123M08Rik ENSMUSG00000085614

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Gene: 1700123M08Rik ENSMUSG00000085614

Summary

About Us

Get help

Our sister sites

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