Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: 1700121N20Rik ENSMUSG00000092066

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Description

RIKEN cDNA 1700121N20 gene [Source:MGI Symbol;Acc:MGI:1923889]

Location

Chromosome 12: 106,403,491-106,413,999 reverse strand.

GRCm39:CM001005.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000294845.1	1700121N20Rik-202	1248	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000294847.1	1700121N20Rik-204	2236	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000167922.3	1700121N20Rik-201	1087	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000294848.1	1700121N20Rik-205	1023	No protein	-	lncRNA		-
ENSMUST00000294851.1	1700121N20Rik-208	1014	No protein	-	lncRNA		-
ENSMUST00000294849.1	1700121N20Rik-206	949	No protein	-	lncRNA		-
ENSMUST00000294852.1	1700121N20Rik-209	935	No protein	-	lncRNA		-
ENSMUST00000294850.1	1700121N20Rik-207	864	No protein	-	lncRNA		-
ENSMUST00000294855.1	1700121N20Rik-212	728	No protein	-	lncRNA		-
ENSMUST00000294854.1	1700121N20Rik-211	599	No protein	-	lncRNA		-
ENSMUST00000294853.1	1700121N20Rik-210	568	No protein	-	lncRNA		-
ENSMUST00000294846.1	1700121N20Rik-203	492	No protein	-	lncRNA		-

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Summary

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