Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: 1700109I08Rik ENSMUSG00000101261

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Description

RIKEN cDNA 1700109I08 gene [Source:MGI Symbol;Acc:MGI:1920841]

Location

Chromosome 14: 39,376,075-39,434,858 forward strand.

GRCm39:CM001007.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000330101.1	1700109I08Rik-202	846	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000330104.1	1700109I08Rik-205	793	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000330102.1	1700109I08Rik-203	745	No protein	-	lncRNA		-
ENSMUST00000330107.1	1700109I08Rik-208	726	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000330106.1	1700109I08Rik-207	678	No protein	-	lncRNA		-
ENSMUST00000330103.1	1700109I08Rik-204	648	No protein	-	lncRNA		-
ENSMUST00000330105.1	1700109I08Rik-206	636	No protein	-	lncRNA		-
ENSMUST00000330110.1	1700109I08Rik-211	601	No protein	-	lncRNA		-
ENSMUST00000330108.1	1700109I08Rik-209	504	No protein	-	lncRNA		-
ENSMUST00000185680.3	1700109I08Rik-201	450	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000330111.1	1700109I08Rik-212	416	No protein	-	lncRNA		-
ENSMUST00000330109.1	1700109I08Rik-210	306	No protein	-	lncRNA		-

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Summary

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