Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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ID History
- Gene history

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Gene: 1700108N06Rik ENSMUSG00000106034

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Description

RIKEN cDNA 1700108N06 gene [Source:MGI Symbol;Acc:MGI:1920810]

Gene Synonyms

Gm38694, Gm43642

Location

Chromosome 5: 11,398,642-11,465,244 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000284919.1	1700108N06Rik-202	673	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000284929.1	1700108N06Rik-212	1865	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000284927.1	1700108N06Rik-210	1072	No protein	-	lncRNA		-
ENSMUST00000284928.1	1700108N06Rik-211	1001	No protein	-	lncRNA		-
ENSMUST00000284923.1	1700108N06Rik-206	934	No protein	-	lncRNA		-
ENSMUST00000284920.1	1700108N06Rik-203	896	No protein	-	lncRNA		-
ENSMUST00000284926.1	1700108N06Rik-209	854	No protein	-	lncRNA		-
ENSMUST00000284921.1	1700108N06Rik-204	805	No protein	-	lncRNA		-
ENSMUST00000284930.1	1700108N06Rik-213	799	No protein	-	lncRNA		-
ENSMUST00000196572.2	1700108N06Rik-201	681	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000284924.1	1700108N06Rik-207	588	No protein	-	lncRNA		-
ENSMUST00000284925.1	1700108N06Rik-208	495	No protein	-	lncRNA		-
ENSMUST00000284922.1	1700108N06Rik-205	452	No protein	-	lncRNA		-
ENSMUST00000284931.1	1700108N06Rik-214	410	No protein	-	lncRNA		-

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Summary

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