Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
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Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: 1700108I11Rik ENSMUSG00000125611

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Description

RIKEN cDNA 1700108I11 gene [Source:MGI Symbol;Acc:MGI:1921548]

Location

Chromosome 4: 129,733,077-129,747,070 reverse strand.

GRCm39:CM000997.3

About this gene

This gene has 13 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000271272.1	1700108I11Rik-201	249	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000271282.1	1700108I11Rik-211	750	No protein	-	lncRNA		-
ENSMUST00000271278.1	1700108I11Rik-207	632	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000271277.1	1700108I11Rik-206	605	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000271283.1	1700108I11Rik-212	587	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000271279.1	1700108I11Rik-208	545	No protein	-	lncRNA		-
ENSMUST00000271275.1	1700108I11Rik-204	447	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000271276.1	1700108I11Rik-205	405	No protein	-	lncRNA		-
ENSMUST00000271281.1	1700108I11Rik-210	345	No protein	-	lncRNA		-
ENSMUST00000271274.1	1700108I11Rik-203	314	No protein	-	lncRNA		-
ENSMUST00000271284.1	1700108I11Rik-213	293	No protein	-	lncRNA		-
ENSMUST00000271273.1	1700108I11Rik-202	286	No protein	-	lncRNA		-
ENSMUST00000271280.1	1700108I11Rik-209	256	No protein	-	lncRNA		-

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Summary

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