Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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Ontologies
- GO: Anatomical entity
Phenotypes
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Gene: 1700093J21Rik ENSMUSG00000117289

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Description

RIKEN cDNA 1700093J21 gene [Source:MGI Symbol;Acc:MGI:1921546]

Location

Chromosome 16: 95,883,856-95,890,273 forward strand.

GRCm39:CM001009.3

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000320907.1	1700093J21Rik-202	671	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000320909.1	1700093J21Rik-204	893	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000320908.1	1700093J21Rik-203	809	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000320910.1	1700093J21Rik-205	679	No protein	-	lncRNA		-
ENSMUST00000233171.2	1700093J21Rik-201	647	No protein	-	lncRNA		-
ENSMUST00000320912.1	1700093J21Rik-207	501	No protein	-	lncRNA		-
ENSMUST00000320911.1	1700093J21Rik-206	287	No protein	-	lncRNA		-

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Summary

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