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- Splice variants
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Gene: 1700065J18Rik ENSMUSG00000100872

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Description

RIKEN cDNA 1700065J18 gene [Source:MGI Symbol;Acc:MGI:1920705]

Location

Chromosome 1: 192,517,237-192,525,660 forward strand.

GRCm39:CM000994.3

About this gene

This gene has 15 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000267377.1	1700065J18Rik-203	684	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000267378.1	1700065J18Rik-204	1547	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000267384.1	1700065J18Rik-210	1104	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000267381.1	1700065J18Rik-207	565	No protein	-	lncRNA		-
ENSMUST00000267382.1	1700065J18Rik-208	504	No protein	-	lncRNA		-
ENSMUST00000267386.1	1700065J18Rik-212	487	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000267380.1	1700065J18Rik-206	469	No protein	-	lncRNA		-
ENSMUST00000267383.1	1700065J18Rik-209	438	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000267379.1	1700065J18Rik-205	425	No protein	-	lncRNA		-
ENSMUST00000190576.4	1700065J18Rik-202	419	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000267385.1	1700065J18Rik-211	409	No protein	-	lncRNA		-
ENSMUST00000267387.1	1700065J18Rik-213	408	No protein	-	lncRNA		-
ENSMUST00000188648.3	1700065J18Rik-201	391	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000267389.1	1700065J18Rik-215	374	No protein	-	lncRNA		-
ENSMUST00000267388.1	1700065J18Rik-214	366	No protein	-	lncRNA		-

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Summary

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