Gene: 1700057H21Rik ENSMUSG00000086007

Description

RIKEN cDNA 1700057H21 gene [Source:MGI Symbol;Acc:MGI:1920625]

Location

Chromosome 2: 51,253,037-51,416,699 reverse strand.

GRCm39:CM000995.3

About this gene

This gene has 50 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000251309.1	1700057H21Rik-204	542	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000251530.1	1700057H21Rik-244	1595	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000251336.1	1700057H21Rik-231	1490	No protein	-	lncRNA	-
ENSMUST00000251335.1	1700057H21Rik-230	1485	No protein	-	lncRNA	-
ENSMUST00000251525.1	1700057H21Rik-239	1206	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000251531.1	1700057H21Rik-245	1194	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000251532.1	1700057H21Rik-246	1073	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000251330.1	1700057H21Rik-225	1063	No protein	-	lncRNA	-
ENSMUST00000251522.1	1700057H21Rik-236	1058	No protein	-	lncRNA	-
ENSMUST00000251310.1	1700057H21Rik-205	1047	No protein	-	lncRNA	-
ENSMUST00000251322.1	1700057H21Rik-217	1021	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000251534.1	1700057H21Rik-248	967	No protein	-	lncRNA	-
ENSMUST00000251524.1	1700057H21Rik-238	946	No protein	-	lncRNA	-
ENSMUST00000251324.1	1700057H21Rik-219	913	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000251337.1	1700057H21Rik-232	902	No protein	-	lncRNA	-
ENSMUST00000251318.1	1700057H21Rik-213	839	No protein	-	lncRNA	-
ENSMUST00000251312.1	1700057H21Rik-207	829	No protein	-	lncRNA	-
ENSMUST00000251321.1	1700057H21Rik-216	811	No protein	-	lncRNA	-
ENSMUST00000251529.1	1700057H21Rik-243	810	No protein	-	lncRNA	-
ENSMUST00000152467.3	1700057H21Rik-202	791	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000251325.1	1700057H21Rik-220	757	No protein	-	lncRNA	-
ENSMUST00000251315.1	1700057H21Rik-210	746	No protein	-	lncRNA	-
ENSMUST00000251338.1	1700057H21Rik-233	733	No protein	-	lncRNA	-
ENSMUST00000251317.1	1700057H21Rik-212	732	No protein	-	lncRNA	-
ENSMUST00000251319.1	1700057H21Rik-214	727	No protein	-	lncRNA	-
ENSMUST00000251323.1	1700057H21Rik-218	694	No protein	-	lncRNA	-
ENSMUST00000251327.1	1700057H21Rik-222	676	No protein	-	lncRNA	-
ENSMUST00000251320.1	1700057H21Rik-215	654	No protein	-	lncRNA	-
ENSMUST00000142804.3	1700057H21Rik-201	648	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000251311.1	1700057H21Rik-206	627	No protein	-	lncRNA	-
ENSMUST00000251339.1	1700057H21Rik-234	621	No protein	-	lncRNA	-
ENSMUST00000251331.1	1700057H21Rik-226	610	No protein	-	lncRNA	-
ENSMUST00000251316.1	1700057H21Rik-211	578	No protein	-	lncRNA	-
ENSMUST00000251326.1	1700057H21Rik-221	571	No protein	-	lncRNA	-
ENSMUST00000251313.1	1700057H21Rik-208	565	No protein	-	lncRNA	-
ENSMUST00000251332.1	1700057H21Rik-227	556	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000251334.1	1700057H21Rik-229	526	No protein	-	lncRNA	-
ENSMUST00000251328.1	1700057H21Rik-223	509	No protein	-	lncRNA	-
ENSMUST00000154530.2	1700057H21Rik-203	506	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000251533.1	1700057H21Rik-247	506	No protein	-	lncRNA	-
ENSMUST00000251329.1	1700057H21Rik-224	460	No protein	-	lncRNA	-
ENSMUST00000251314.1	1700057H21Rik-209	438	No protein	-	lncRNA	-
ENSMUST00000251333.1	1700057H21Rik-228	438	No protein	-	lncRNA	-
ENSMUST00000251526.1	1700057H21Rik-240	432	No protein	-	lncRNA	-
ENSMUST00000251535.1	1700057H21Rik-249	410	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000251528.1	1700057H21Rik-242	374	No protein	-	lncRNA	-
ENSMUST00000251536.1	1700057H21Rik-250	372	No protein	-	lncRNA	-
ENSMUST00000251527.1	1700057H21Rik-241	371	No protein	-	lncRNA	-
ENSMUST00000251521.1	1700057H21Rik-235	298	No protein	-	lncRNA	-
ENSMUST00000251523.1	1700057H21Rik-237	278	No protein	-	lncRNA	-

Gene: 1700057H21Rik ENSMUSG00000086007

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Gene: 1700057H21Rik ENSMUSG00000086007

Summary

About Us

Get help

Our sister sites

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